Gene : Brara.J00076 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR12802:SF43 - PROTEIN CCA1-RELATED Genomic Order:  76
Name:  ? Brara.J00076 Secondary Identifier:  ? PAC:30611345
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00076 0.5kb upstream 0.5kb upstream 4348 true A10: 393901-398248 Brassica rapa FPsc
Brara.J00076 0.5kb upstream 0.5kb upstream 500 false A10: 393901-394400 Brassica rapa FPsc
Brara.J00076 0.5kb downstream 0.5kb downstream 4348 true A10: 394401-398748 Brassica rapa FPsc
Brara.J00076 0.5kb downstream 0.5kb downstream 500 false A10: 398249-398748 Brassica rapa FPsc
Brara.J00076 1.0kb upstream 1.0kb upstream 4848 true A10: 393401-398248 Brassica rapa FPsc
Brara.J00076 1.0kb upstream 1.0kb upstream 1000 false A10: 393401-394400 Brassica rapa FPsc
Brara.J00076 1.0kb downstream 1.0kb downstream 4848 true A10: 394401-399248 Brassica rapa FPsc
Brara.J00076 1.0kb downstream 1.0kb downstream 1000 false A10: 398249-399248 Brassica rapa FPsc
Brara.J00076 2.0kb upstream 2.0kb upstream 5848 true A10: 392401-398248 Brassica rapa FPsc
Brara.J00076 2.0kb upstream 2.0kb upstream 2000 false A10: 392401-394400 Brassica rapa FPsc
Brara.J00076 2.0kb downstream 2.0kb downstream 5848 true A10: 394401-400248 Brassica rapa FPsc
Brara.J00076 2.0kb downstream 2.0kb downstream 2000 false A10: 398249-400248 Brassica rapa FPsc
Brara.J00076 5.0kb upstream 5.0kb upstream 8848 true A10: 389401-398248 Brassica rapa FPsc
Brara.J00076 5.0kb upstream 5.0kb upstream 5000 false A10: 389401-394400 Brassica rapa FPsc
Brara.J00076 5.0kb downstream 5.0kb downstream 8848 true A10: 394401-403248 Brassica rapa FPsc
Brara.J00076 5.0kb downstream 5.0kb downstream 5000 false A10: 398249-403248 Brassica rapa FPsc
Brara.J00076 10.0kb upstream 10.0kb upstream 13848 true A10: 384401-398248 Brassica rapa FPsc
Brara.J00076 10.0kb upstream 10.0kb upstream 10000 false A10: 384401-394400 Brassica rapa FPsc
Brara.J00076 10.0kb downstream 10.0kb downstream 13848 true A10: 394401-408248 Brassica rapa FPsc
Brara.J00076 10.0kb downstream 10.0kb downstream 10000 false A10: 398249-408248 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372845 5261 Brassicaceae View MSA
123827456 5264 Brassicales-Malvales View MSA
124346704 5266 SBM View MSA
124237237 5268 Malvidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier