Gene : Brara.J00786 B. rapa FPsc v1.3
Defline:  (1 of 3) 1.14.13.129 - Beta-carotene 3-hydroxylase / Beta-carotene 3,3'-monooxygenase Genomic Order:  786
Name:  ? Brara.J00786 Secondary Identifier:  ? PAC:30612409
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CAROTENOID-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5944 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00786 0.5kb upstream 0.5kb upstream 3292 true A10: 7723235-7726526 Brassica rapa FPsc
Brara.J00786 0.5kb upstream 0.5kb upstream 500 false A10: 7726027-7726526 Brassica rapa FPsc
Brara.J00786 0.5kb downstream 0.5kb downstream 3292 true A10: 7722735-7726026 Brassica rapa FPsc
Brara.J00786 0.5kb downstream 0.5kb downstream 500 false A10: 7722735-7723234 Brassica rapa FPsc
Brara.J00786 1.0kb upstream 1.0kb upstream 3792 true A10: 7723235-7727026 Brassica rapa FPsc
Brara.J00786 1.0kb upstream 1.0kb upstream 1000 false A10: 7726027-7727026 Brassica rapa FPsc
Brara.J00786 1.0kb downstream 1.0kb downstream 3792 true A10: 7722235-7726026 Brassica rapa FPsc
Brara.J00786 1.0kb downstream 1.0kb downstream 1000 false A10: 7722235-7723234 Brassica rapa FPsc
Brara.J00786 2.0kb upstream 2.0kb upstream 4792 true A10: 7723235-7728026 Brassica rapa FPsc
Brara.J00786 2.0kb upstream 2.0kb upstream 2000 false A10: 7726027-7728026 Brassica rapa FPsc
Brara.J00786 2.0kb downstream 2.0kb downstream 4792 true A10: 7721235-7726026 Brassica rapa FPsc
Brara.J00786 2.0kb downstream 2.0kb downstream 2000 false A10: 7721235-7723234 Brassica rapa FPsc
Brara.J00786 5.0kb upstream 5.0kb upstream 7792 true A10: 7723235-7731026 Brassica rapa FPsc
Brara.J00786 5.0kb upstream 5.0kb upstream 5000 false A10: 7726027-7731026 Brassica rapa FPsc
Brara.J00786 5.0kb downstream 5.0kb downstream 7792 true A10: 7718235-7726026 Brassica rapa FPsc
Brara.J00786 5.0kb downstream 5.0kb downstream 5000 false A10: 7718235-7723234 Brassica rapa FPsc
Brara.J00786 10.0kb upstream 10.0kb upstream 12792 true A10: 7723235-7736026 Brassica rapa FPsc
Brara.J00786 10.0kb upstream 10.0kb upstream 10000 false A10: 7726027-7736026 Brassica rapa FPsc
Brara.J00786 10.0kb downstream 10.0kb downstream 12792 true A10: 7713235-7726026 Brassica rapa FPsc
Brara.J00786 10.0kb downstream 10.0kb downstream 10000 false A10: 7713235-7723234 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360367 5261 Brassicaceae View MSA
123837541 5264 Brassicales-Malvales View MSA
124338230 5266 SBM View MSA
124251518 5268 Malvidae View MSA
124066838 5270 Rosid View MSA
123749049 5271 Pentapetalae View MSA
122787521 5272 Eudicot View MSA
122046641 5273 Angiosperm View MSA
123429104 5275 Viridiplantae View MSA
121351007 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier