Gene : Brara.C00778 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR22812 - CHROMOBOX PROTEIN Genomic Order:  778
Name:  ? Brara.C00778 Secondary Identifier:  ? PAC:30615696
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00778 0.5kb upstream 0.5kb upstream 2957 true A03: 3569830-3572786 Brassica rapa FPsc
Brara.C00778 0.5kb upstream 0.5kb upstream 500 false A03: 3572287-3572786 Brassica rapa FPsc
Brara.C00778 0.5kb downstream 0.5kb downstream 2957 true A03: 3569330-3572286 Brassica rapa FPsc
Brara.C00778 0.5kb downstream 0.5kb downstream 500 false A03: 3569330-3569829 Brassica rapa FPsc
Brara.C00778 1.0kb upstream 1.0kb upstream 3457 true A03: 3569830-3573286 Brassica rapa FPsc
Brara.C00778 1.0kb upstream 1.0kb upstream 1000 false A03: 3572287-3573286 Brassica rapa FPsc
Brara.C00778 1.0kb downstream 1.0kb downstream 3457 true A03: 3568830-3572286 Brassica rapa FPsc
Brara.C00778 1.0kb downstream 1.0kb downstream 1000 false A03: 3568830-3569829 Brassica rapa FPsc
Brara.C00778 2.0kb upstream 2.0kb upstream 4457 true A03: 3569830-3574286 Brassica rapa FPsc
Brara.C00778 2.0kb upstream 2.0kb upstream 2000 false A03: 3572287-3574286 Brassica rapa FPsc
Brara.C00778 2.0kb downstream 2.0kb downstream 4457 true A03: 3567830-3572286 Brassica rapa FPsc
Brara.C00778 2.0kb downstream 2.0kb downstream 2000 false A03: 3567830-3569829 Brassica rapa FPsc
Brara.C00778 5.0kb upstream 5.0kb upstream 7457 true A03: 3569830-3577286 Brassica rapa FPsc
Brara.C00778 5.0kb upstream 5.0kb upstream 5000 false A03: 3572287-3577286 Brassica rapa FPsc
Brara.C00778 5.0kb downstream 5.0kb downstream 7457 true A03: 3564830-3572286 Brassica rapa FPsc
Brara.C00778 5.0kb downstream 5.0kb downstream 5000 false A03: 3564830-3569829 Brassica rapa FPsc
Brara.C00778 10.0kb upstream 10.0kb upstream 12457 true A03: 3569830-3582286 Brassica rapa FPsc
Brara.C00778 10.0kb upstream 10.0kb upstream 10000 false A03: 3572287-3582286 Brassica rapa FPsc
Brara.C00778 10.0kb downstream 10.0kb downstream 12457 true A03: 3559830-3572286 Brassica rapa FPsc
Brara.C00778 10.0kb downstream 10.0kb downstream 10000 false A03: 3559830-3569829 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347006 5261 Brassicaceae Singleton cluster - no MSA
123786605 5264 Brassicales-Malvales Singleton cluster - no MSA
124284707 5266 SBM Singleton cluster - no MSA
124138868 5268 Malvidae Singleton cluster - no MSA
124041882 5270 Rosid View MSA
123743602 5271 Pentapetalae View MSA
122791541 5272 Eudicot View MSA
122044379 5273 Angiosperm View MSA
121347782 5274 Embryophyte View MSA
123380626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier