Gene : Brara.E02170 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  2170
Name:  ? Brara.E02170 Secondary Identifier:  ? PAC:30626850
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-162 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5686 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7211 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02170 0.5kb upstream 0.5kb upstream 2736 true A05: 19894022-19896757 Brassica rapa FPsc
Brara.E02170 0.5kb upstream 0.5kb upstream 500 false A05: 19894022-19894521 Brassica rapa FPsc
Brara.E02170 0.5kb downstream 0.5kb downstream 2736 true A05: 19894522-19897257 Brassica rapa FPsc
Brara.E02170 0.5kb downstream 0.5kb downstream 500 false A05: 19896758-19897257 Brassica rapa FPsc
Brara.E02170 1.0kb upstream 1.0kb upstream 3236 true A05: 19893522-19896757 Brassica rapa FPsc
Brara.E02170 1.0kb upstream 1.0kb upstream 1000 false A05: 19893522-19894521 Brassica rapa FPsc
Brara.E02170 1.0kb downstream 1.0kb downstream 3236 true A05: 19894522-19897757 Brassica rapa FPsc
Brara.E02170 1.0kb downstream 1.0kb downstream 1000 false A05: 19896758-19897757 Brassica rapa FPsc
Brara.E02170 2.0kb upstream 2.0kb upstream 4236 true A05: 19892522-19896757 Brassica rapa FPsc
Brara.E02170 2.0kb upstream 2.0kb upstream 2000 false A05: 19892522-19894521 Brassica rapa FPsc
Brara.E02170 2.0kb downstream 2.0kb downstream 4236 true A05: 19894522-19898757 Brassica rapa FPsc
Brara.E02170 2.0kb downstream 2.0kb downstream 2000 false A05: 19896758-19898757 Brassica rapa FPsc
Brara.E02170 5.0kb upstream 5.0kb upstream 7236 true A05: 19889522-19896757 Brassica rapa FPsc
Brara.E02170 5.0kb upstream 5.0kb upstream 5000 false A05: 19889522-19894521 Brassica rapa FPsc
Brara.E02170 5.0kb downstream 5.0kb downstream 7236 true A05: 19894522-19901757 Brassica rapa FPsc
Brara.E02170 5.0kb downstream 5.0kb downstream 5000 false A05: 19896758-19901757 Brassica rapa FPsc
Brara.E02170 10.0kb upstream 10.0kb upstream 12236 true A05: 19884522-19896757 Brassica rapa FPsc
Brara.E02170 10.0kb upstream 10.0kb upstream 10000 false A05: 19884522-19894521 Brassica rapa FPsc
Brara.E02170 10.0kb downstream 10.0kb downstream 12236 true A05: 19894522-19906757 Brassica rapa FPsc
Brara.E02170 10.0kb downstream 10.0kb downstream 10000 false A05: 19896758-19906757 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361849 5261 Brassicaceae View MSA
123834078 5264 Brassicales-Malvales View MSA
124341674 5266 SBM View MSA
124240648 5268 Malvidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier