Gene : Brara.C00879 B. rapa FPsc v1.3
Defline:  (1 of 1) PF00415//PF01363//PF08381//PF13713//PF16457//PF16627 - Regulator of chromosome condensation (RCC1) repeat (RCC1) // FYVE zinc finger (FYVE) // Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) // Pleckstrin homology domain (PH_12) // Unstructured region between BRX_N and BRX domain (BRX_assoc) Genomic Order:  879
Name:  ? Brara.C00879 Secondary Identifier:  ? PAC:30615024
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00879 0.5kb upstream 0.5kb upstream 6168 true A03: 4088261-4094428 Brassica rapa FPsc
Brara.C00879 0.5kb upstream 0.5kb upstream 500 false A03: 4093929-4094428 Brassica rapa FPsc
Brara.C00879 0.5kb downstream 0.5kb downstream 6168 true A03: 4087761-4093928 Brassica rapa FPsc
Brara.C00879 0.5kb downstream 0.5kb downstream 500 false A03: 4087761-4088260 Brassica rapa FPsc
Brara.C00879 1.0kb upstream 1.0kb upstream 6668 true A03: 4088261-4094928 Brassica rapa FPsc
Brara.C00879 1.0kb upstream 1.0kb upstream 1000 false A03: 4093929-4094928 Brassica rapa FPsc
Brara.C00879 1.0kb downstream 1.0kb downstream 6668 true A03: 4087261-4093928 Brassica rapa FPsc
Brara.C00879 1.0kb downstream 1.0kb downstream 1000 false A03: 4087261-4088260 Brassica rapa FPsc
Brara.C00879 2.0kb upstream 2.0kb upstream 7668 true A03: 4088261-4095928 Brassica rapa FPsc
Brara.C00879 2.0kb upstream 2.0kb upstream 2000 false A03: 4093929-4095928 Brassica rapa FPsc
Brara.C00879 2.0kb downstream 2.0kb downstream 7668 true A03: 4086261-4093928 Brassica rapa FPsc
Brara.C00879 2.0kb downstream 2.0kb downstream 2000 false A03: 4086261-4088260 Brassica rapa FPsc
Brara.C00879 5.0kb upstream 5.0kb upstream 10668 true A03: 4088261-4098928 Brassica rapa FPsc
Brara.C00879 5.0kb upstream 5.0kb upstream 5000 false A03: 4093929-4098928 Brassica rapa FPsc
Brara.C00879 5.0kb downstream 5.0kb downstream 10668 true A03: 4083261-4093928 Brassica rapa FPsc
Brara.C00879 5.0kb downstream 5.0kb downstream 5000 false A03: 4083261-4088260 Brassica rapa FPsc
Brara.C00879 10.0kb upstream 10.0kb upstream 15668 true A03: 4088261-4103928 Brassica rapa FPsc
Brara.C00879 10.0kb upstream 10.0kb upstream 10000 false A03: 4093929-4103928 Brassica rapa FPsc
Brara.C00879 10.0kb downstream 10.0kb downstream 15668 true A03: 4078261-4093928 Brassica rapa FPsc
Brara.C00879 10.0kb downstream 10.0kb downstream 10000 false A03: 4078261-4088260 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360724 5261 Brassicaceae View MSA
123827646 5264 Brassicales-Malvales View MSA
124344597 5266 SBM View MSA
124238581 5268 Malvidae View MSA
124062866 5270 Rosid View MSA
123743329 5271 Pentapetalae View MSA
122789808 5272 Eudicot View MSA
122045930 5273 Angiosperm View MSA
121350863 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier