Gene : Brara.C00650 B. rapa FPsc v1.3
Defline:  (1 of 6) 5.1.3.3 - Aldose 1-epimerase / Mutarotase Genomic Order:  650
Name:  ? Brara.C00650 Secondary Identifier:  ? PAC:30616018
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY66-422 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00650 0.5kb upstream 0.5kb upstream 2936 true A03: 3008274-3011209 Brassica rapa FPsc
Brara.C00650 0.5kb upstream 0.5kb upstream 500 false A03: 3008274-3008773 Brassica rapa FPsc
Brara.C00650 0.5kb downstream 0.5kb downstream 2936 true A03: 3008774-3011709 Brassica rapa FPsc
Brara.C00650 0.5kb downstream 0.5kb downstream 500 false A03: 3011210-3011709 Brassica rapa FPsc
Brara.C00650 1.0kb upstream 1.0kb upstream 3436 true A03: 3007774-3011209 Brassica rapa FPsc
Brara.C00650 1.0kb upstream 1.0kb upstream 1000 false A03: 3007774-3008773 Brassica rapa FPsc
Brara.C00650 1.0kb downstream 1.0kb downstream 3436 true A03: 3008774-3012209 Brassica rapa FPsc
Brara.C00650 1.0kb downstream 1.0kb downstream 1000 false A03: 3011210-3012209 Brassica rapa FPsc
Brara.C00650 2.0kb upstream 2.0kb upstream 4436 true A03: 3006774-3011209 Brassica rapa FPsc
Brara.C00650 2.0kb upstream 2.0kb upstream 2000 false A03: 3006774-3008773 Brassica rapa FPsc
Brara.C00650 2.0kb downstream 2.0kb downstream 4436 true A03: 3008774-3013209 Brassica rapa FPsc
Brara.C00650 2.0kb downstream 2.0kb downstream 2000 false A03: 3011210-3013209 Brassica rapa FPsc
Brara.C00650 5.0kb upstream 5.0kb upstream 7436 true A03: 3003774-3011209 Brassica rapa FPsc
Brara.C00650 5.0kb upstream 5.0kb upstream 5000 false A03: 3003774-3008773 Brassica rapa FPsc
Brara.C00650 5.0kb downstream 5.0kb downstream 7436 true A03: 3008774-3016209 Brassica rapa FPsc
Brara.C00650 5.0kb downstream 5.0kb downstream 5000 false A03: 3011210-3016209 Brassica rapa FPsc
Brara.C00650 10.0kb upstream 10.0kb upstream 12436 true A03: 2998774-3011209 Brassica rapa FPsc
Brara.C00650 10.0kb upstream 10.0kb upstream 10000 false A03: 2998774-3008773 Brassica rapa FPsc
Brara.C00650 10.0kb downstream 10.0kb downstream 12436 true A03: 3008774-3021209 Brassica rapa FPsc
Brara.C00650 10.0kb downstream 10.0kb downstream 10000 false A03: 3011210-3021209 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381360 5261 Brassicaceae View MSA
123834020 5264 Brassicales-Malvales View MSA
124349035 5266 SBM View MSA
124244913 5268 Malvidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier