Gene : Brara.I05445 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR22600//PTHR22600:SF14 - BETA-HEXOSAMINIDASE Genomic Order:  5445
Name:  ? Brara.I05445 Secondary Identifier:  ? PAC:30645061
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6902 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05445 0.5kb upstream 0.5kb upstream 3109 true A09: 43879010-43882118 Brassica rapa FPsc
Brara.I05445 0.5kb upstream 0.5kb upstream 500 false A09: 43881619-43882118 Brassica rapa FPsc
Brara.I05445 0.5kb downstream 0.5kb downstream 3109 true A09: 43878510-43881618 Brassica rapa FPsc
Brara.I05445 0.5kb downstream 0.5kb downstream 500 false A09: 43878510-43879009 Brassica rapa FPsc
Brara.I05445 1.0kb upstream 1.0kb upstream 3609 true A09: 43879010-43882618 Brassica rapa FPsc
Brara.I05445 1.0kb upstream 1.0kb upstream 1000 false A09: 43881619-43882618 Brassica rapa FPsc
Brara.I05445 1.0kb downstream 1.0kb downstream 3609 true A09: 43878010-43881618 Brassica rapa FPsc
Brara.I05445 1.0kb downstream 1.0kb downstream 1000 false A09: 43878010-43879009 Brassica rapa FPsc
Brara.I05445 2.0kb upstream 2.0kb upstream 4609 true A09: 43879010-43883618 Brassica rapa FPsc
Brara.I05445 2.0kb upstream 2.0kb upstream 2000 false A09: 43881619-43883618 Brassica rapa FPsc
Brara.I05445 2.0kb downstream 2.0kb downstream 4609 true A09: 43877010-43881618 Brassica rapa FPsc
Brara.I05445 2.0kb downstream 2.0kb downstream 2000 false A09: 43877010-43879009 Brassica rapa FPsc
Brara.I05445 5.0kb upstream 5.0kb upstream 7609 true A09: 43879010-43886618 Brassica rapa FPsc
Brara.I05445 5.0kb upstream 5.0kb upstream 5000 false A09: 43881619-43886618 Brassica rapa FPsc
Brara.I05445 5.0kb downstream 5.0kb downstream 7609 true A09: 43874010-43881618 Brassica rapa FPsc
Brara.I05445 5.0kb downstream 5.0kb downstream 5000 false A09: 43874010-43879009 Brassica rapa FPsc
Brara.I05445 10.0kb upstream 10.0kb upstream 12609 true A09: 43879010-43891618 Brassica rapa FPsc
Brara.I05445 10.0kb upstream 10.0kb upstream 10000 false A09: 43881619-43891618 Brassica rapa FPsc
Brara.I05445 10.0kb downstream 10.0kb downstream 12609 true A09: 43869010-43881618 Brassica rapa FPsc
Brara.I05445 10.0kb downstream 10.0kb downstream 10000 false A09: 43869010-43879009 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361529 5261 Brassicaceae View MSA
123831341 5264 Brassicales-Malvales View MSA
124339325 5266 SBM View MSA
124240039 5268 Malvidae View MSA
124063455 5270 Rosid View MSA
123738859 5271 Pentapetalae View MSA
122789804 5272 Eudicot View MSA
122047899 5273 Angiosperm View MSA
121347698 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier