Gene : Brara.I05489 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11183:SF33 - GALACTINOL SYNTHASE 1-RELATED Genomic Order:  5489
Name:  ? Brara.I05489 Secondary Identifier:  ? PAC:30643857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5337 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05489 0.5kb upstream 0.5kb upstream 1781 true A09: 44162564-44164344 Brassica rapa FPsc
Brara.I05489 0.5kb upstream 0.5kb upstream 500 false A09: 44162564-44163063 Brassica rapa FPsc
Brara.I05489 0.5kb downstream 0.5kb downstream 1781 true A09: 44163064-44164844 Brassica rapa FPsc
Brara.I05489 0.5kb downstream 0.5kb downstream 500 false A09: 44164345-44164844 Brassica rapa FPsc
Brara.I05489 1.0kb upstream 1.0kb upstream 2281 true A09: 44162064-44164344 Brassica rapa FPsc
Brara.I05489 1.0kb upstream 1.0kb upstream 1000 false A09: 44162064-44163063 Brassica rapa FPsc
Brara.I05489 1.0kb downstream 1.0kb downstream 2281 true A09: 44163064-44165344 Brassica rapa FPsc
Brara.I05489 1.0kb downstream 1.0kb downstream 1000 false A09: 44164345-44165344 Brassica rapa FPsc
Brara.I05489 2.0kb upstream 2.0kb upstream 3281 true A09: 44161064-44164344 Brassica rapa FPsc
Brara.I05489 2.0kb upstream 2.0kb upstream 2000 false A09: 44161064-44163063 Brassica rapa FPsc
Brara.I05489 2.0kb downstream 2.0kb downstream 3281 true A09: 44163064-44166344 Brassica rapa FPsc
Brara.I05489 2.0kb downstream 2.0kb downstream 2000 false A09: 44164345-44166344 Brassica rapa FPsc
Brara.I05489 5.0kb upstream 5.0kb upstream 6281 true A09: 44158064-44164344 Brassica rapa FPsc
Brara.I05489 5.0kb upstream 5.0kb upstream 5000 false A09: 44158064-44163063 Brassica rapa FPsc
Brara.I05489 5.0kb downstream 5.0kb downstream 6281 true A09: 44163064-44169344 Brassica rapa FPsc
Brara.I05489 5.0kb downstream 5.0kb downstream 5000 false A09: 44164345-44169344 Brassica rapa FPsc
Brara.I05489 10.0kb upstream 10.0kb upstream 11281 true A09: 44153064-44164344 Brassica rapa FPsc
Brara.I05489 10.0kb upstream 10.0kb upstream 10000 false A09: 44153064-44163063 Brassica rapa FPsc
Brara.I05489 10.0kb downstream 10.0kb downstream 11281 true A09: 44163064-44174344 Brassica rapa FPsc
Brara.I05489 10.0kb downstream 10.0kb downstream 10000 false A09: 44164345-44174344 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376753 5261 Brassicaceae View MSA
123842385 5264 Brassicales-Malvales View MSA
124323451 5266 SBM View MSA
124256963 5268 Malvidae View MSA
124072040 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier