Gene : Brara.I05510 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN Genomic Order:  5510
Name:  ? Brara.I05510 Secondary Identifier:  ? PAC:30642880
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05510 0.5kb upstream 0.5kb upstream 2909 true A09: 44282699-44285607 Brassica rapa FPsc
Brara.I05510 0.5kb upstream 0.5kb upstream 500 false A09: 44285108-44285607 Brassica rapa FPsc
Brara.I05510 0.5kb downstream 0.5kb downstream 2909 true A09: 44282199-44285107 Brassica rapa FPsc
Brara.I05510 0.5kb downstream 0.5kb downstream 500 false A09: 44282199-44282698 Brassica rapa FPsc
Brara.I05510 1.0kb upstream 1.0kb upstream 3409 true A09: 44282699-44286107 Brassica rapa FPsc
Brara.I05510 1.0kb upstream 1.0kb upstream 1000 false A09: 44285108-44286107 Brassica rapa FPsc
Brara.I05510 1.0kb downstream 1.0kb downstream 3409 true A09: 44281699-44285107 Brassica rapa FPsc
Brara.I05510 1.0kb downstream 1.0kb downstream 1000 false A09: 44281699-44282698 Brassica rapa FPsc
Brara.I05510 2.0kb upstream 2.0kb upstream 4409 true A09: 44282699-44287107 Brassica rapa FPsc
Brara.I05510 2.0kb upstream 2.0kb upstream 2000 false A09: 44285108-44287107 Brassica rapa FPsc
Brara.I05510 2.0kb downstream 2.0kb downstream 4409 true A09: 44280699-44285107 Brassica rapa FPsc
Brara.I05510 2.0kb downstream 2.0kb downstream 2000 false A09: 44280699-44282698 Brassica rapa FPsc
Brara.I05510 5.0kb upstream 5.0kb upstream 7409 true A09: 44282699-44290107 Brassica rapa FPsc
Brara.I05510 5.0kb upstream 5.0kb upstream 5000 false A09: 44285108-44290107 Brassica rapa FPsc
Brara.I05510 5.0kb downstream 5.0kb downstream 7409 true A09: 44277699-44285107 Brassica rapa FPsc
Brara.I05510 5.0kb downstream 5.0kb downstream 5000 false A09: 44277699-44282698 Brassica rapa FPsc
Brara.I05510 10.0kb upstream 10.0kb upstream 12409 true A09: 44282699-44295107 Brassica rapa FPsc
Brara.I05510 10.0kb upstream 10.0kb upstream 10000 false A09: 44285108-44295107 Brassica rapa FPsc
Brara.I05510 10.0kb downstream 10.0kb downstream 12409 true A09: 44272699-44285107 Brassica rapa FPsc
Brara.I05510 10.0kb downstream 10.0kb downstream 10000 false A09: 44272699-44282698 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368149 5261 Brassicaceae View MSA
123828408 5264 Brassicales-Malvales View MSA
124339676 5266 SBM View MSA
124254043 5268 Malvidae View MSA
124068096 5270 Rosid View MSA
123752266 5271 Pentapetalae View MSA
122787898 5272 Eudicot View MSA
122046706 5273 Angiosperm View MSA
121343893 5274 Embryophyte View MSA
123425417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier