Gene : Brara.I05334 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31356:SF10 - L-ASCORBATE PEROXIDASE 2, CYTOSOLIC Genomic Order:  5334
Name:  ? Brara.I05334 Secondary Identifier:  ? PAC:30646095
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2261 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6959 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05334 0.5kb upstream 0.5kb upstream 3009 true A09: 43406689-43409697 Brassica rapa FPsc
Brara.I05334 0.5kb upstream 0.5kb upstream 500 false A09: 43409198-43409697 Brassica rapa FPsc
Brara.I05334 0.5kb downstream 0.5kb downstream 3009 true A09: 43406189-43409197 Brassica rapa FPsc
Brara.I05334 0.5kb downstream 0.5kb downstream 500 false A09: 43406189-43406688 Brassica rapa FPsc
Brara.I05334 1.0kb upstream 1.0kb upstream 3509 true A09: 43406689-43410197 Brassica rapa FPsc
Brara.I05334 1.0kb upstream 1.0kb upstream 1000 false A09: 43409198-43410197 Brassica rapa FPsc
Brara.I05334 1.0kb downstream 1.0kb downstream 3509 true A09: 43405689-43409197 Brassica rapa FPsc
Brara.I05334 1.0kb downstream 1.0kb downstream 1000 false A09: 43405689-43406688 Brassica rapa FPsc
Brara.I05334 2.0kb upstream 2.0kb upstream 4509 true A09: 43406689-43411197 Brassica rapa FPsc
Brara.I05334 2.0kb upstream 2.0kb upstream 2000 false A09: 43409198-43411197 Brassica rapa FPsc
Brara.I05334 2.0kb downstream 2.0kb downstream 4509 true A09: 43404689-43409197 Brassica rapa FPsc
Brara.I05334 2.0kb downstream 2.0kb downstream 2000 false A09: 43404689-43406688 Brassica rapa FPsc
Brara.I05334 5.0kb upstream 5.0kb upstream 7509 true A09: 43406689-43414197 Brassica rapa FPsc
Brara.I05334 5.0kb upstream 5.0kb upstream 5000 false A09: 43409198-43414197 Brassica rapa FPsc
Brara.I05334 5.0kb downstream 5.0kb downstream 7509 true A09: 43401689-43409197 Brassica rapa FPsc
Brara.I05334 5.0kb downstream 5.0kb downstream 5000 false A09: 43401689-43406688 Brassica rapa FPsc
Brara.I05334 10.0kb upstream 10.0kb upstream 12509 true A09: 43406689-43419197 Brassica rapa FPsc
Brara.I05334 10.0kb upstream 10.0kb upstream 10000 false A09: 43409198-43419197 Brassica rapa FPsc
Brara.I05334 10.0kb downstream 10.0kb downstream 12509 true A09: 43396689-43409197 Brassica rapa FPsc
Brara.I05334 10.0kb downstream 10.0kb downstream 10000 false A09: 43396689-43406688 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365618 5261 Brassicaceae View MSA
123839523 5264 Brassicales-Malvales View MSA
124339715 5266 SBM View MSA
124248895 5268 Malvidae View MSA
124068994 5270 Rosid View MSA
123741454 5271 Pentapetalae View MSA
122796920 5272 Eudicot View MSA
122044564 5273 Angiosperm View MSA
121344996 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier