Gene : Brara.J01248 B. rapa FPsc v1.3
Defline:  (1 of 1) PF00628//PF05641//PF16135 - PHD-finger (PHD) // Agenet domain (Agenet) // TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  1248
Name:  ? Brara.J01248 Secondary Identifier:  ? PAC:30612073
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01248 0.5kb upstream 0.5kb upstream 5463 true A10: 11532775-11538237 Brassica rapa FPsc
Brara.J01248 0.5kb upstream 0.5kb upstream 500 false A10: 11537738-11538237 Brassica rapa FPsc
Brara.J01248 0.5kb downstream 0.5kb downstream 5463 true A10: 11532275-11537737 Brassica rapa FPsc
Brara.J01248 0.5kb downstream 0.5kb downstream 500 false A10: 11532275-11532774 Brassica rapa FPsc
Brara.J01248 1.0kb upstream 1.0kb upstream 5963 true A10: 11532775-11538737 Brassica rapa FPsc
Brara.J01248 1.0kb upstream 1.0kb upstream 1000 false A10: 11537738-11538737 Brassica rapa FPsc
Brara.J01248 1.0kb downstream 1.0kb downstream 5963 true A10: 11531775-11537737 Brassica rapa FPsc
Brara.J01248 1.0kb downstream 1.0kb downstream 1000 false A10: 11531775-11532774 Brassica rapa FPsc
Brara.J01248 2.0kb upstream 2.0kb upstream 6963 true A10: 11532775-11539737 Brassica rapa FPsc
Brara.J01248 2.0kb upstream 2.0kb upstream 2000 false A10: 11537738-11539737 Brassica rapa FPsc
Brara.J01248 2.0kb downstream 2.0kb downstream 6963 true A10: 11530775-11537737 Brassica rapa FPsc
Brara.J01248 2.0kb downstream 2.0kb downstream 2000 false A10: 11530775-11532774 Brassica rapa FPsc
Brara.J01248 5.0kb upstream 5.0kb upstream 9963 true A10: 11532775-11542737 Brassica rapa FPsc
Brara.J01248 5.0kb upstream 5.0kb upstream 5000 false A10: 11537738-11542737 Brassica rapa FPsc
Brara.J01248 5.0kb downstream 5.0kb downstream 9963 true A10: 11527775-11537737 Brassica rapa FPsc
Brara.J01248 5.0kb downstream 5.0kb downstream 5000 false A10: 11527775-11532774 Brassica rapa FPsc
Brara.J01248 10.0kb upstream 10.0kb upstream 14963 true A10: 11532775-11547737 Brassica rapa FPsc
Brara.J01248 10.0kb upstream 10.0kb upstream 10000 false A10: 11537738-11547737 Brassica rapa FPsc
Brara.J01248 10.0kb downstream 10.0kb downstream 14963 true A10: 11522775-11537737 Brassica rapa FPsc
Brara.J01248 10.0kb downstream 10.0kb downstream 10000 false A10: 11522775-11532774 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364177 5261 Brassicaceae View MSA
123832187 5264 Brassicales-Malvales View MSA
124345630 5266 SBM View MSA
124248675 5268 Malvidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier