Gene : Brara.C01535 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31301:SF4 - LOB DOMAIN-CONTAINING PROTEIN 12 Genomic Order:  1535
Name:  ? Brara.C01535 Secondary Identifier:  ? PAC:30617320
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01535 0.5kb upstream 0.5kb upstream 1686 true A03: 7445668-7447353 Brassica rapa FPsc
Brara.C01535 0.5kb upstream 0.5kb upstream 500 false A03: 7445668-7446167 Brassica rapa FPsc
Brara.C01535 0.5kb downstream 0.5kb downstream 1686 true A03: 7446168-7447853 Brassica rapa FPsc
Brara.C01535 0.5kb downstream 0.5kb downstream 500 false A03: 7447354-7447853 Brassica rapa FPsc
Brara.C01535 1.0kb upstream 1.0kb upstream 2186 true A03: 7445168-7447353 Brassica rapa FPsc
Brara.C01535 1.0kb upstream 1.0kb upstream 1000 false A03: 7445168-7446167 Brassica rapa FPsc
Brara.C01535 1.0kb downstream 1.0kb downstream 2186 true A03: 7446168-7448353 Brassica rapa FPsc
Brara.C01535 1.0kb downstream 1.0kb downstream 1000 false A03: 7447354-7448353 Brassica rapa FPsc
Brara.C01535 2.0kb upstream 2.0kb upstream 3186 true A03: 7444168-7447353 Brassica rapa FPsc
Brara.C01535 2.0kb upstream 2.0kb upstream 2000 false A03: 7444168-7446167 Brassica rapa FPsc
Brara.C01535 2.0kb downstream 2.0kb downstream 3186 true A03: 7446168-7449353 Brassica rapa FPsc
Brara.C01535 2.0kb downstream 2.0kb downstream 2000 false A03: 7447354-7449353 Brassica rapa FPsc
Brara.C01535 5.0kb upstream 5.0kb upstream 6186 true A03: 7441168-7447353 Brassica rapa FPsc
Brara.C01535 5.0kb upstream 5.0kb upstream 5000 false A03: 7441168-7446167 Brassica rapa FPsc
Brara.C01535 5.0kb downstream 5.0kb downstream 6186 true A03: 7446168-7452353 Brassica rapa FPsc
Brara.C01535 5.0kb downstream 5.0kb downstream 5000 false A03: 7447354-7452353 Brassica rapa FPsc
Brara.C01535 10.0kb upstream 10.0kb upstream 11186 true A03: 7436168-7447353 Brassica rapa FPsc
Brara.C01535 10.0kb upstream 10.0kb upstream 10000 false A03: 7436168-7446167 Brassica rapa FPsc
Brara.C01535 10.0kb downstream 10.0kb downstream 11186 true A03: 7446168-7457353 Brassica rapa FPsc
Brara.C01535 10.0kb downstream 10.0kb downstream 10000 false A03: 7447354-7457353 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347466 5261 Brassicaceae Singleton cluster - no MSA
123841354 5264 Brassicales-Malvales View MSA
124348573 5266 SBM View MSA
124246036 5268 Malvidae View MSA
124071000 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier