Gene : Brara.J01141 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10459:SF72 - DNA LIGASE 4 Genomic Order:  1141
Name:  ? Brara.J01141 Secondary Identifier:  ? PAC:30611721
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01141 0.5kb upstream 0.5kb upstream 7536 true A10: 10866667-10874202 Brassica rapa FPsc
Brara.J01141 0.5kb upstream 0.5kb upstream 500 false A10: 10873703-10874202 Brassica rapa FPsc
Brara.J01141 0.5kb downstream 0.5kb downstream 7536 true A10: 10866167-10873702 Brassica rapa FPsc
Brara.J01141 0.5kb downstream 0.5kb downstream 500 false A10: 10866167-10866666 Brassica rapa FPsc
Brara.J01141 1.0kb upstream 1.0kb upstream 8036 true A10: 10866667-10874702 Brassica rapa FPsc
Brara.J01141 1.0kb upstream 1.0kb upstream 1000 false A10: 10873703-10874702 Brassica rapa FPsc
Brara.J01141 1.0kb downstream 1.0kb downstream 8036 true A10: 10865667-10873702 Brassica rapa FPsc
Brara.J01141 1.0kb downstream 1.0kb downstream 1000 false A10: 10865667-10866666 Brassica rapa FPsc
Brara.J01141 2.0kb upstream 2.0kb upstream 9036 true A10: 10866667-10875702 Brassica rapa FPsc
Brara.J01141 2.0kb upstream 2.0kb upstream 2000 false A10: 10873703-10875702 Brassica rapa FPsc
Brara.J01141 2.0kb downstream 2.0kb downstream 9036 true A10: 10864667-10873702 Brassica rapa FPsc
Brara.J01141 2.0kb downstream 2.0kb downstream 2000 false A10: 10864667-10866666 Brassica rapa FPsc
Brara.J01141 5.0kb upstream 5.0kb upstream 12036 true A10: 10866667-10878702 Brassica rapa FPsc
Brara.J01141 5.0kb upstream 5.0kb upstream 5000 false A10: 10873703-10878702 Brassica rapa FPsc
Brara.J01141 5.0kb downstream 5.0kb downstream 12036 true A10: 10861667-10873702 Brassica rapa FPsc
Brara.J01141 5.0kb downstream 5.0kb downstream 5000 false A10: 10861667-10866666 Brassica rapa FPsc
Brara.J01141 10.0kb upstream 10.0kb upstream 17036 true A10: 10866667-10883702 Brassica rapa FPsc
Brara.J01141 10.0kb upstream 10.0kb upstream 10000 false A10: 10873703-10883702 Brassica rapa FPsc
Brara.J01141 10.0kb downstream 10.0kb downstream 17036 true A10: 10856667-10873702 Brassica rapa FPsc
Brara.J01141 10.0kb downstream 10.0kb downstream 10000 false A10: 10856667-10866666 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371497 5261 Brassicaceae View MSA
123834373 5264 Brassicales-Malvales View MSA
124350738 5266 SBM View MSA
124252693 5268 Malvidae View MSA
124066259 5270 Rosid View MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier