Gene : Brara.C01522 B. rapa FPsc v1.3
Defline:  (1 of 3) 1.6.5.9//1.6.99.3 - NADH:ubiquinone reductase (non-electrogenic) / Ubiquinone reductase // NADH dehydrogenase / Type I dehydrogenase Genomic Order:  1522
Name:  ? Brara.C01522 Secondary Identifier:  ? PAC:30619698
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01522 0.5kb upstream 0.5kb upstream 3856 true A03: 7352376-7356231 Brassica rapa FPsc
Brara.C01522 0.5kb upstream 0.5kb upstream 500 false A03: 7355732-7356231 Brassica rapa FPsc
Brara.C01522 0.5kb downstream 0.5kb downstream 3856 true A03: 7351876-7355731 Brassica rapa FPsc
Brara.C01522 0.5kb downstream 0.5kb downstream 500 false A03: 7351876-7352375 Brassica rapa FPsc
Brara.C01522 1.0kb upstream 1.0kb upstream 4356 true A03: 7352376-7356731 Brassica rapa FPsc
Brara.C01522 1.0kb upstream 1.0kb upstream 1000 false A03: 7355732-7356731 Brassica rapa FPsc
Brara.C01522 1.0kb downstream 1.0kb downstream 4356 true A03: 7351376-7355731 Brassica rapa FPsc
Brara.C01522 1.0kb downstream 1.0kb downstream 1000 false A03: 7351376-7352375 Brassica rapa FPsc
Brara.C01522 2.0kb upstream 2.0kb upstream 5356 true A03: 7352376-7357731 Brassica rapa FPsc
Brara.C01522 2.0kb upstream 2.0kb upstream 2000 false A03: 7355732-7357731 Brassica rapa FPsc
Brara.C01522 2.0kb downstream 2.0kb downstream 5356 true A03: 7350376-7355731 Brassica rapa FPsc
Brara.C01522 2.0kb downstream 2.0kb downstream 2000 false A03: 7350376-7352375 Brassica rapa FPsc
Brara.C01522 5.0kb upstream 5.0kb upstream 8356 true A03: 7352376-7360731 Brassica rapa FPsc
Brara.C01522 5.0kb upstream 5.0kb upstream 5000 false A03: 7355732-7360731 Brassica rapa FPsc
Brara.C01522 5.0kb downstream 5.0kb downstream 8356 true A03: 7347376-7355731 Brassica rapa FPsc
Brara.C01522 5.0kb downstream 5.0kb downstream 5000 false A03: 7347376-7352375 Brassica rapa FPsc
Brara.C01522 10.0kb upstream 10.0kb upstream 13356 true A03: 7352376-7365731 Brassica rapa FPsc
Brara.C01522 10.0kb upstream 10.0kb upstream 10000 false A03: 7355732-7365731 Brassica rapa FPsc
Brara.C01522 10.0kb downstream 10.0kb downstream 13356 true A03: 7342376-7355731 Brassica rapa FPsc
Brara.C01522 10.0kb downstream 10.0kb downstream 10000 false A03: 7342376-7352375 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361481 5261 Brassicaceae View MSA
123838919 5264 Brassicales-Malvales View MSA
124340078 5266 SBM View MSA
124246164 5268 Malvidae View MSA
124062110 5270 Rosid View MSA
123742437 5271 Pentapetalae View MSA
122794116 5272 Eudicot View MSA
122050116 5273 Angiosperm View MSA
121344067 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier