Gene : Brara.C01346 B. rapa FPsc v1.3

Defline:  (1 of 10) KOG0114 - Predicted RNA-binding protein (RRM superfamily) Genomic Order:  1346
Name:  ? Brara.C01346 Secondary Identifier:  ? PAC:30615608

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01346 0.5kb upstream 0.5kb upstream 2008 true A03: 6308930-6310937 Brassica rapa FPsc
Brara.C01346 0.5kb upstream 0.5kb upstream 500 false A03: 6310438-6310937 Brassica rapa FPsc
Brara.C01346 0.5kb downstream 0.5kb downstream 2008 true A03: 6308430-6310437 Brassica rapa FPsc
Brara.C01346 0.5kb downstream 0.5kb downstream 500 false A03: 6308430-6308929 Brassica rapa FPsc
Brara.C01346 1.0kb upstream 1.0kb upstream 2508 true A03: 6308930-6311437 Brassica rapa FPsc
Brara.C01346 1.0kb upstream 1.0kb upstream 1000 false A03: 6310438-6311437 Brassica rapa FPsc
Brara.C01346 1.0kb downstream 1.0kb downstream 2508 true A03: 6307930-6310437 Brassica rapa FPsc
Brara.C01346 1.0kb downstream 1.0kb downstream 1000 false A03: 6307930-6308929 Brassica rapa FPsc
Brara.C01346 2.0kb upstream 2.0kb upstream 3508 true A03: 6308930-6312437 Brassica rapa FPsc
Brara.C01346 2.0kb upstream 2.0kb upstream 2000 false A03: 6310438-6312437 Brassica rapa FPsc
Brara.C01346 2.0kb downstream 2.0kb downstream 3508 true A03: 6306930-6310437 Brassica rapa FPsc
Brara.C01346 2.0kb downstream 2.0kb downstream 2000 false A03: 6306930-6308929 Brassica rapa FPsc
Brara.C01346 5.0kb upstream 5.0kb upstream 6508 true A03: 6308930-6315437 Brassica rapa FPsc
Brara.C01346 5.0kb upstream 5.0kb upstream 5000 false A03: 6310438-6315437 Brassica rapa FPsc
Brara.C01346 5.0kb downstream 5.0kb downstream 6508 true A03: 6303930-6310437 Brassica rapa FPsc
Brara.C01346 5.0kb downstream 5.0kb downstream 5000 false A03: 6303930-6308929 Brassica rapa FPsc
Brara.C01346 10.0kb upstream 10.0kb upstream 11508 true A03: 6308930-6320437 Brassica rapa FPsc
Brara.C01346 10.0kb upstream 10.0kb upstream 10000 false A03: 6310438-6320437 Brassica rapa FPsc
Brara.C01346 10.0kb downstream 10.0kb downstream 11508 true A03: 6298930-6310437 Brassica rapa FPsc
Brara.C01346 10.0kb downstream 10.0kb downstream 10000 false A03: 6298930-6308929 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367739 5261 Brassicaceae View MSA
123829201 5264 Brassicales-Malvales View MSA
124340231 5266 SBM View MSA
124244201 5268 Malvidae View MSA
124065656 5270 Rosid View MSA
123746310 5271 Pentapetalae View MSA
122791948 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier