Gene : Brara.C01389 B. rapa FPsc v1.3
Defline:  (1 of 1) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  1389
Name:  ? Brara.C01389 Secondary Identifier:  ? PAC:30617282
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUGLNSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6963 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01389 0.5kb upstream 0.5kb upstream 9848 true A03: 6567286-6577133 Brassica rapa FPsc
Brara.C01389 0.5kb upstream 0.5kb upstream 500 false A03: 6576634-6577133 Brassica rapa FPsc
Brara.C01389 0.5kb downstream 0.5kb downstream 9848 true A03: 6566786-6576633 Brassica rapa FPsc
Brara.C01389 0.5kb downstream 0.5kb downstream 500 false A03: 6566786-6567285 Brassica rapa FPsc
Brara.C01389 1.0kb upstream 1.0kb upstream 10348 true A03: 6567286-6577633 Brassica rapa FPsc
Brara.C01389 1.0kb upstream 1.0kb upstream 1000 false A03: 6576634-6577633 Brassica rapa FPsc
Brara.C01389 1.0kb downstream 1.0kb downstream 10348 true A03: 6566286-6576633 Brassica rapa FPsc
Brara.C01389 1.0kb downstream 1.0kb downstream 1000 false A03: 6566286-6567285 Brassica rapa FPsc
Brara.C01389 2.0kb upstream 2.0kb upstream 11348 true A03: 6567286-6578633 Brassica rapa FPsc
Brara.C01389 2.0kb upstream 2.0kb upstream 2000 false A03: 6576634-6578633 Brassica rapa FPsc
Brara.C01389 2.0kb downstream 2.0kb downstream 11348 true A03: 6565286-6576633 Brassica rapa FPsc
Brara.C01389 2.0kb downstream 2.0kb downstream 2000 false A03: 6565286-6567285 Brassica rapa FPsc
Brara.C01389 5.0kb upstream 5.0kb upstream 14348 true A03: 6567286-6581633 Brassica rapa FPsc
Brara.C01389 5.0kb upstream 5.0kb upstream 5000 false A03: 6576634-6581633 Brassica rapa FPsc
Brara.C01389 5.0kb downstream 5.0kb downstream 14348 true A03: 6562286-6576633 Brassica rapa FPsc
Brara.C01389 5.0kb downstream 5.0kb downstream 5000 false A03: 6562286-6567285 Brassica rapa FPsc
Brara.C01389 10.0kb upstream 10.0kb upstream 19348 true A03: 6567286-6586633 Brassica rapa FPsc
Brara.C01389 10.0kb upstream 10.0kb upstream 10000 false A03: 6576634-6586633 Brassica rapa FPsc
Brara.C01389 10.0kb downstream 10.0kb downstream 19348 true A03: 6557286-6576633 Brassica rapa FPsc
Brara.C01389 10.0kb downstream 10.0kb downstream 10000 false A03: 6557286-6567285 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366728 5261 Brassicaceae View MSA
123832225 5264 Brassicales-Malvales View MSA
124341222 5266 SBM View MSA
124241008 5268 Malvidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier