Gene : Brara.C01221 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12389 - ZINC FINGER PROTEIN 294 Genomic Order:  1221
Name:  ? Brara.C01221 Secondary Identifier:  ? PAC:30616395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01221 0.5kb upstream 0.5kb upstream 4230 true A03: 5707542-5711771 Brassica rapa FPsc
Brara.C01221 0.5kb upstream 0.5kb upstream 500 false A03: 5711272-5711771 Brassica rapa FPsc
Brara.C01221 0.5kb downstream 0.5kb downstream 4230 true A03: 5707042-5711271 Brassica rapa FPsc
Brara.C01221 0.5kb downstream 0.5kb downstream 500 false A03: 5707042-5707541 Brassica rapa FPsc
Brara.C01221 1.0kb upstream 1.0kb upstream 4730 true A03: 5707542-5712271 Brassica rapa FPsc
Brara.C01221 1.0kb upstream 1.0kb upstream 1000 false A03: 5711272-5712271 Brassica rapa FPsc
Brara.C01221 1.0kb downstream 1.0kb downstream 4730 true A03: 5706542-5711271 Brassica rapa FPsc
Brara.C01221 1.0kb downstream 1.0kb downstream 1000 false A03: 5706542-5707541 Brassica rapa FPsc
Brara.C01221 2.0kb upstream 2.0kb upstream 5730 true A03: 5707542-5713271 Brassica rapa FPsc
Brara.C01221 2.0kb upstream 2.0kb upstream 2000 false A03: 5711272-5713271 Brassica rapa FPsc
Brara.C01221 2.0kb downstream 2.0kb downstream 5730 true A03: 5705542-5711271 Brassica rapa FPsc
Brara.C01221 2.0kb downstream 2.0kb downstream 2000 false A03: 5705542-5707541 Brassica rapa FPsc
Brara.C01221 5.0kb upstream 5.0kb upstream 8730 true A03: 5707542-5716271 Brassica rapa FPsc
Brara.C01221 5.0kb upstream 5.0kb upstream 5000 false A03: 5711272-5716271 Brassica rapa FPsc
Brara.C01221 5.0kb downstream 5.0kb downstream 8730 true A03: 5702542-5711271 Brassica rapa FPsc
Brara.C01221 5.0kb downstream 5.0kb downstream 5000 false A03: 5702542-5707541 Brassica rapa FPsc
Brara.C01221 10.0kb upstream 10.0kb upstream 13730 true A03: 5707542-5721271 Brassica rapa FPsc
Brara.C01221 10.0kb upstream 10.0kb upstream 10000 false A03: 5711272-5721271 Brassica rapa FPsc
Brara.C01221 10.0kb downstream 10.0kb downstream 13730 true A03: 5697542-5711271 Brassica rapa FPsc
Brara.C01221 10.0kb downstream 10.0kb downstream 10000 false A03: 5697542-5707541 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347214 5261 Brassicaceae Singleton cluster - no MSA
123786778 5264 Brassicales-Malvales Singleton cluster - no MSA
124284876 5266 SBM Singleton cluster - no MSA
124139006 5268 Malvidae Singleton cluster - no MSA
124064210 5270 Rosid View MSA
123737906 5271 Pentapetalae View MSA
122790270 5272 Eudicot View MSA
122043227 5273 Angiosperm View MSA
121344406 5274 Embryophyte View MSA
123424491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier