Gene : Brara.J00522 B. rapa FPsc v1.3

Defline:  (1 of 8) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  522
Name:  ? Brara.J00522 Secondary Identifier:  ? PAC:30613518

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00522 0.5kb upstream 0.5kb upstream 3834 true A10: 3213414-3217247 Brassica rapa FPsc
Brara.J00522 0.5kb upstream 0.5kb upstream 500 false A10: 3216748-3217247 Brassica rapa FPsc
Brara.J00522 0.5kb downstream 0.5kb downstream 3834 true A10: 3212914-3216747 Brassica rapa FPsc
Brara.J00522 0.5kb downstream 0.5kb downstream 500 false A10: 3212914-3213413 Brassica rapa FPsc
Brara.J00522 1.0kb upstream 1.0kb upstream 4334 true A10: 3213414-3217747 Brassica rapa FPsc
Brara.J00522 1.0kb upstream 1.0kb upstream 1000 false A10: 3216748-3217747 Brassica rapa FPsc
Brara.J00522 1.0kb downstream 1.0kb downstream 4334 true A10: 3212414-3216747 Brassica rapa FPsc
Brara.J00522 1.0kb downstream 1.0kb downstream 1000 false A10: 3212414-3213413 Brassica rapa FPsc
Brara.J00522 2.0kb upstream 2.0kb upstream 5334 true A10: 3213414-3218747 Brassica rapa FPsc
Brara.J00522 2.0kb upstream 2.0kb upstream 2000 false A10: 3216748-3218747 Brassica rapa FPsc
Brara.J00522 2.0kb downstream 2.0kb downstream 5334 true A10: 3211414-3216747 Brassica rapa FPsc
Brara.J00522 2.0kb downstream 2.0kb downstream 2000 false A10: 3211414-3213413 Brassica rapa FPsc
Brara.J00522 5.0kb upstream 5.0kb upstream 8334 true A10: 3213414-3221747 Brassica rapa FPsc
Brara.J00522 5.0kb upstream 5.0kb upstream 5000 false A10: 3216748-3221747 Brassica rapa FPsc
Brara.J00522 5.0kb downstream 5.0kb downstream 8334 true A10: 3208414-3216747 Brassica rapa FPsc
Brara.J00522 5.0kb downstream 5.0kb downstream 5000 false A10: 3208414-3213413 Brassica rapa FPsc
Brara.J00522 10.0kb upstream 10.0kb upstream 13334 true A10: 3213414-3226747 Brassica rapa FPsc
Brara.J00522 10.0kb upstream 10.0kb upstream 10000 false A10: 3216748-3226747 Brassica rapa FPsc
Brara.J00522 10.0kb downstream 10.0kb downstream 13334 true A10: 3203414-3216747 Brassica rapa FPsc
Brara.J00522 10.0kb downstream 10.0kb downstream 10000 false A10: 3203414-3213413 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346410 5261 Brassicaceae Singleton cluster - no MSA
123839378 5264 Brassicales-Malvales View MSA
124340625 5266 SBM View MSA
124242668 5268 Malvidae View MSA
124063345 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier