Gene : Brara.C02094 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22763:SF44 - E3 UBIQUITIN LIGASE Genomic Order:  2094
Name:  ? Brara.C02094 Secondary Identifier:  ? PAC:30618976
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02094 0.5kb upstream 0.5kb upstream 2419 true A03: 10445616-10448034 Brassica rapa FPsc
Brara.C02094 0.5kb upstream 0.5kb upstream 500 false A03: 10445616-10446115 Brassica rapa FPsc
Brara.C02094 0.5kb downstream 0.5kb downstream 2419 true A03: 10446116-10448534 Brassica rapa FPsc
Brara.C02094 0.5kb downstream 0.5kb downstream 500 false A03: 10448035-10448534 Brassica rapa FPsc
Brara.C02094 1.0kb upstream 1.0kb upstream 2919 true A03: 10445116-10448034 Brassica rapa FPsc
Brara.C02094 1.0kb upstream 1.0kb upstream 1000 false A03: 10445116-10446115 Brassica rapa FPsc
Brara.C02094 1.0kb downstream 1.0kb downstream 2919 true A03: 10446116-10449034 Brassica rapa FPsc
Brara.C02094 1.0kb downstream 1.0kb downstream 1000 false A03: 10448035-10449034 Brassica rapa FPsc
Brara.C02094 2.0kb upstream 2.0kb upstream 3919 true A03: 10444116-10448034 Brassica rapa FPsc
Brara.C02094 2.0kb upstream 2.0kb upstream 2000 false A03: 10444116-10446115 Brassica rapa FPsc
Brara.C02094 2.0kb downstream 2.0kb downstream 3919 true A03: 10446116-10450034 Brassica rapa FPsc
Brara.C02094 2.0kb downstream 2.0kb downstream 2000 false A03: 10448035-10450034 Brassica rapa FPsc
Brara.C02094 5.0kb upstream 5.0kb upstream 6919 true A03: 10441116-10448034 Brassica rapa FPsc
Brara.C02094 5.0kb upstream 5.0kb upstream 5000 false A03: 10441116-10446115 Brassica rapa FPsc
Brara.C02094 5.0kb downstream 5.0kb downstream 6919 true A03: 10446116-10453034 Brassica rapa FPsc
Brara.C02094 5.0kb downstream 5.0kb downstream 5000 false A03: 10448035-10453034 Brassica rapa FPsc
Brara.C02094 10.0kb upstream 10.0kb upstream 11919 true A03: 10436116-10448034 Brassica rapa FPsc
Brara.C02094 10.0kb upstream 10.0kb upstream 10000 false A03: 10436116-10446115 Brassica rapa FPsc
Brara.C02094 10.0kb downstream 10.0kb downstream 11919 true A03: 10446116-10458034 Brassica rapa FPsc
Brara.C02094 10.0kb downstream 10.0kb downstream 10000 false A03: 10448035-10458034 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360206 5261 Brassicaceae View MSA
123839779 5264 Brassicales-Malvales View MSA
124341553 5266 SBM View MSA
124242912 5268 Malvidae View MSA
124070952 5270 Rosid View MSA
123745999 5271 Pentapetalae View MSA
122790564 5272 Eudicot View MSA
122048435 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier