Gene : Brara.E02822 B. rapa FPsc v1.3
Defline:  (1 of 146) PF02519 - Auxin responsive protein (Auxin_inducible) Genomic Order:  2822
Name:  ? Brara.E02822 Secondary Identifier:  ? PAC:30623675
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02822 0.5kb upstream 0.5kb upstream 1245 true A05: 24297745-24298989 Brassica rapa FPsc
Brara.E02822 0.5kb upstream 0.5kb upstream 500 false A05: 24297745-24298244 Brassica rapa FPsc
Brara.E02822 0.5kb downstream 0.5kb downstream 1245 true A05: 24298245-24299489 Brassica rapa FPsc
Brara.E02822 0.5kb downstream 0.5kb downstream 500 false A05: 24298990-24299489 Brassica rapa FPsc
Brara.E02822 1.0kb upstream 1.0kb upstream 1745 true A05: 24297245-24298989 Brassica rapa FPsc
Brara.E02822 1.0kb upstream 1.0kb upstream 1000 false A05: 24297245-24298244 Brassica rapa FPsc
Brara.E02822 1.0kb downstream 1.0kb downstream 1745 true A05: 24298245-24299989 Brassica rapa FPsc
Brara.E02822 1.0kb downstream 1.0kb downstream 1000 false A05: 24298990-24299989 Brassica rapa FPsc
Brara.E02822 2.0kb upstream 2.0kb upstream 2745 true A05: 24296245-24298989 Brassica rapa FPsc
Brara.E02822 2.0kb upstream 2.0kb upstream 2000 false A05: 24296245-24298244 Brassica rapa FPsc
Brara.E02822 2.0kb downstream 2.0kb downstream 2745 true A05: 24298245-24300989 Brassica rapa FPsc
Brara.E02822 2.0kb downstream 2.0kb downstream 2000 false A05: 24298990-24300989 Brassica rapa FPsc
Brara.E02822 5.0kb upstream 5.0kb upstream 5745 true A05: 24293245-24298989 Brassica rapa FPsc
Brara.E02822 5.0kb upstream 5.0kb upstream 5000 false A05: 24293245-24298244 Brassica rapa FPsc
Brara.E02822 5.0kb downstream 5.0kb downstream 5745 true A05: 24298245-24303989 Brassica rapa FPsc
Brara.E02822 5.0kb downstream 5.0kb downstream 5000 false A05: 24298990-24303989 Brassica rapa FPsc
Brara.E02822 10.0kb upstream 10.0kb upstream 10745 true A05: 24288245-24298989 Brassica rapa FPsc
Brara.E02822 10.0kb upstream 10.0kb upstream 10000 false A05: 24288245-24298244 Brassica rapa FPsc
Brara.E02822 10.0kb downstream 10.0kb downstream 10745 true A05: 24298245-24308989 Brassica rapa FPsc
Brara.E02822 10.0kb downstream 10.0kb downstream 10000 false A05: 24298990-24308989 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349166 5261 Brassicaceae Singleton cluster - no MSA
123788397 5264 Brassicales-Malvales Singleton cluster - no MSA
124286431 5266 SBM Singleton cluster - no MSA
124140299 5268 Malvidae Singleton cluster - no MSA
124071169 5270 Rosid View MSA
123753786 5271 Pentapetalae View MSA
122797448 5272 Eudicot View MSA
122051602 5273 Angiosperm View MSA
121351344 5274 Embryophyte View MSA
123382129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier