Gene : Brara.C01923 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Genomic Order:  1923
Name:  ? Brara.C01923 Secondary Identifier:  ? PAC:30619326
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01923 0.5kb upstream 0.5kb upstream 3257 true A03: 9512465-9515721 Brassica rapa FPsc
Brara.C01923 0.5kb upstream 0.5kb upstream 500 false A03: 9512465-9512964 Brassica rapa FPsc
Brara.C01923 0.5kb downstream 0.5kb downstream 3257 true A03: 9512965-9516221 Brassica rapa FPsc
Brara.C01923 0.5kb downstream 0.5kb downstream 500 false A03: 9515722-9516221 Brassica rapa FPsc
Brara.C01923 1.0kb upstream 1.0kb upstream 3757 true A03: 9511965-9515721 Brassica rapa FPsc
Brara.C01923 1.0kb upstream 1.0kb upstream 1000 false A03: 9511965-9512964 Brassica rapa FPsc
Brara.C01923 1.0kb downstream 1.0kb downstream 3757 true A03: 9512965-9516721 Brassica rapa FPsc
Brara.C01923 1.0kb downstream 1.0kb downstream 1000 false A03: 9515722-9516721 Brassica rapa FPsc
Brara.C01923 2.0kb upstream 2.0kb upstream 4757 true A03: 9510965-9515721 Brassica rapa FPsc
Brara.C01923 2.0kb upstream 2.0kb upstream 2000 false A03: 9510965-9512964 Brassica rapa FPsc
Brara.C01923 2.0kb downstream 2.0kb downstream 4757 true A03: 9512965-9517721 Brassica rapa FPsc
Brara.C01923 2.0kb downstream 2.0kb downstream 2000 false A03: 9515722-9517721 Brassica rapa FPsc
Brara.C01923 5.0kb upstream 5.0kb upstream 7757 true A03: 9507965-9515721 Brassica rapa FPsc
Brara.C01923 5.0kb upstream 5.0kb upstream 5000 false A03: 9507965-9512964 Brassica rapa FPsc
Brara.C01923 5.0kb downstream 5.0kb downstream 7757 true A03: 9512965-9520721 Brassica rapa FPsc
Brara.C01923 5.0kb downstream 5.0kb downstream 5000 false A03: 9515722-9520721 Brassica rapa FPsc
Brara.C01923 10.0kb upstream 10.0kb upstream 12757 true A03: 9502965-9515721 Brassica rapa FPsc
Brara.C01923 10.0kb upstream 10.0kb upstream 10000 false A03: 9502965-9512964 Brassica rapa FPsc
Brara.C01923 10.0kb downstream 10.0kb downstream 12757 true A03: 9512965-9525721 Brassica rapa FPsc
Brara.C01923 10.0kb downstream 10.0kb downstream 10000 false A03: 9515722-9525721 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792833 5272 Eudicot View MSA
122376606 5261 Brassicaceae View MSA
123838874 5264 Brassicales-Malvales View MSA
124344193 5266 SBM View MSA
124250832 5268 Malvidae View MSA
124070780 5270 Rosid View MSA
123741557 5271 Pentapetalae View MSA
122042274 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier