Gene : Brara.J01921 B. rapa FPsc v1.3
Defline:  (1 of 3) 4.1.1.18 - Lysine decarboxylase / L-lysine carboxy-lyase Genomic Order:  1921
Name:  ? Brara.J01921 Secondary Identifier:  ? PAC:30612568
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGSPECAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc BSUBPOLYAMSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7528 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01921 0.5kb upstream 0.5kb upstream 2573 true A10: 15353673-15356245 Brassica rapa FPsc
Brara.J01921 0.5kb upstream 0.5kb upstream 500 false A10: 15355746-15356245 Brassica rapa FPsc
Brara.J01921 0.5kb downstream 0.5kb downstream 2573 true A10: 15353173-15355745 Brassica rapa FPsc
Brara.J01921 0.5kb downstream 0.5kb downstream 500 false A10: 15353173-15353672 Brassica rapa FPsc
Brara.J01921 1.0kb upstream 1.0kb upstream 3073 true A10: 15353673-15356745 Brassica rapa FPsc
Brara.J01921 1.0kb upstream 1.0kb upstream 1000 false A10: 15355746-15356745 Brassica rapa FPsc
Brara.J01921 1.0kb downstream 1.0kb downstream 3073 true A10: 15352673-15355745 Brassica rapa FPsc
Brara.J01921 1.0kb downstream 1.0kb downstream 1000 false A10: 15352673-15353672 Brassica rapa FPsc
Brara.J01921 2.0kb upstream 2.0kb upstream 4073 true A10: 15353673-15357745 Brassica rapa FPsc
Brara.J01921 2.0kb upstream 2.0kb upstream 2000 false A10: 15355746-15357745 Brassica rapa FPsc
Brara.J01921 2.0kb downstream 2.0kb downstream 4073 true A10: 15351673-15355745 Brassica rapa FPsc
Brara.J01921 2.0kb downstream 2.0kb downstream 2000 false A10: 15351673-15353672 Brassica rapa FPsc
Brara.J01921 5.0kb upstream 5.0kb upstream 7073 true A10: 15353673-15360745 Brassica rapa FPsc
Brara.J01921 5.0kb upstream 5.0kb upstream 5000 false A10: 15355746-15360745 Brassica rapa FPsc
Brara.J01921 5.0kb downstream 5.0kb downstream 7073 true A10: 15348673-15355745 Brassica rapa FPsc
Brara.J01921 5.0kb downstream 5.0kb downstream 5000 false A10: 15348673-15353672 Brassica rapa FPsc
Brara.J01921 10.0kb upstream 10.0kb upstream 12073 true A10: 15353673-15365745 Brassica rapa FPsc
Brara.J01921 10.0kb upstream 10.0kb upstream 10000 false A10: 15355746-15365745 Brassica rapa FPsc
Brara.J01921 10.0kb downstream 10.0kb downstream 12073 true A10: 15343673-15355745 Brassica rapa FPsc
Brara.J01921 10.0kb downstream 10.0kb downstream 10000 false A10: 15343673-15353672 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369621 5261 Brassicaceae View MSA
123841428 5264 Brassicales-Malvales View MSA
124346938 5266 SBM View MSA
124250445 5268 Malvidae View MSA
124073000 5270 Rosid View MSA
123746333 5271 Pentapetalae View MSA
122785858 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier