Gene : Brara.J01950 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  1950
Name:  ? Brara.J01950 Secondary Identifier:  ? PAC:30611935
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-1264 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4381 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7388 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01950 0.5kb upstream 0.5kb upstream 2538 true A10: 15491095-15493632 Brassica rapa FPsc
Brara.J01950 0.5kb upstream 0.5kb upstream 500 false A10: 15493133-15493632 Brassica rapa FPsc
Brara.J01950 0.5kb downstream 0.5kb downstream 2538 true A10: 15490595-15493132 Brassica rapa FPsc
Brara.J01950 0.5kb downstream 0.5kb downstream 500 false A10: 15490595-15491094 Brassica rapa FPsc
Brara.J01950 1.0kb upstream 1.0kb upstream 3038 true A10: 15491095-15494132 Brassica rapa FPsc
Brara.J01950 1.0kb upstream 1.0kb upstream 1000 false A10: 15493133-15494132 Brassica rapa FPsc
Brara.J01950 1.0kb downstream 1.0kb downstream 3038 true A10: 15490095-15493132 Brassica rapa FPsc
Brara.J01950 1.0kb downstream 1.0kb downstream 1000 false A10: 15490095-15491094 Brassica rapa FPsc
Brara.J01950 2.0kb upstream 2.0kb upstream 4038 true A10: 15491095-15495132 Brassica rapa FPsc
Brara.J01950 2.0kb upstream 2.0kb upstream 2000 false A10: 15493133-15495132 Brassica rapa FPsc
Brara.J01950 2.0kb downstream 2.0kb downstream 4038 true A10: 15489095-15493132 Brassica rapa FPsc
Brara.J01950 2.0kb downstream 2.0kb downstream 2000 false A10: 15489095-15491094 Brassica rapa FPsc
Brara.J01950 5.0kb upstream 5.0kb upstream 7038 true A10: 15491095-15498132 Brassica rapa FPsc
Brara.J01950 5.0kb upstream 5.0kb upstream 5000 false A10: 15493133-15498132 Brassica rapa FPsc
Brara.J01950 5.0kb downstream 5.0kb downstream 7038 true A10: 15486095-15493132 Brassica rapa FPsc
Brara.J01950 5.0kb downstream 5.0kb downstream 5000 false A10: 15486095-15491094 Brassica rapa FPsc
Brara.J01950 10.0kb upstream 10.0kb upstream 12038 true A10: 15491095-15503132 Brassica rapa FPsc
Brara.J01950 10.0kb upstream 10.0kb upstream 10000 false A10: 15493133-15503132 Brassica rapa FPsc
Brara.J01950 10.0kb downstream 10.0kb downstream 12038 true A10: 15481095-15493132 Brassica rapa FPsc
Brara.J01950 10.0kb downstream 10.0kb downstream 10000 false A10: 15481095-15491094 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346066 5261 Brassicaceae Singleton cluster - no MSA
123785811 5264 Brassicales-Malvales Singleton cluster - no MSA
124350225 5266 SBM View MSA
124244588 5268 Malvidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier