Gene : Brara.J01998 B. rapa FPsc v1.3
Defline:  (1 of 1) 1.4.3.16 - L-aspartate oxidase / LASPO Genomic Order:  1998
Name:  ? Brara.J01998 Secondary Identifier:  ? PAC:30611560
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PYRIDNUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01998 0.5kb upstream 0.5kb upstream 4727 true A10: 15730796-15735522 Brassica rapa FPsc
Brara.J01998 0.5kb upstream 0.5kb upstream 500 false A10: 15735023-15735522 Brassica rapa FPsc
Brara.J01998 0.5kb downstream 0.5kb downstream 4727 true A10: 15730296-15735022 Brassica rapa FPsc
Brara.J01998 0.5kb downstream 0.5kb downstream 500 false A10: 15730296-15730795 Brassica rapa FPsc
Brara.J01998 1.0kb upstream 1.0kb upstream 5227 true A10: 15730796-15736022 Brassica rapa FPsc
Brara.J01998 1.0kb upstream 1.0kb upstream 1000 false A10: 15735023-15736022 Brassica rapa FPsc
Brara.J01998 1.0kb downstream 1.0kb downstream 5227 true A10: 15729796-15735022 Brassica rapa FPsc
Brara.J01998 1.0kb downstream 1.0kb downstream 1000 false A10: 15729796-15730795 Brassica rapa FPsc
Brara.J01998 2.0kb upstream 2.0kb upstream 6227 true A10: 15730796-15737022 Brassica rapa FPsc
Brara.J01998 2.0kb upstream 2.0kb upstream 2000 false A10: 15735023-15737022 Brassica rapa FPsc
Brara.J01998 2.0kb downstream 2.0kb downstream 6227 true A10: 15728796-15735022 Brassica rapa FPsc
Brara.J01998 2.0kb downstream 2.0kb downstream 2000 false A10: 15728796-15730795 Brassica rapa FPsc
Brara.J01998 5.0kb upstream 5.0kb upstream 9227 true A10: 15730796-15740022 Brassica rapa FPsc
Brara.J01998 5.0kb upstream 5.0kb upstream 5000 false A10: 15735023-15740022 Brassica rapa FPsc
Brara.J01998 5.0kb downstream 5.0kb downstream 9227 true A10: 15725796-15735022 Brassica rapa FPsc
Brara.J01998 5.0kb downstream 5.0kb downstream 5000 false A10: 15725796-15730795 Brassica rapa FPsc
Brara.J01998 10.0kb upstream 10.0kb upstream 14227 true A10: 15730796-15745022 Brassica rapa FPsc
Brara.J01998 10.0kb upstream 10.0kb upstream 10000 false A10: 15735023-15745022 Brassica rapa FPsc
Brara.J01998 10.0kb downstream 10.0kb downstream 14227 true A10: 15720796-15735022 Brassica rapa FPsc
Brara.J01998 10.0kb downstream 10.0kb downstream 10000 false A10: 15720796-15730795 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362137 5261 Brassicaceae View MSA
123833845 5264 Brassicales-Malvales View MSA
124339867 5266 SBM View MSA
124243494 5268 Malvidae View MSA
124067870 5270 Rosid View MSA
123737542 5271 Pentapetalae View MSA
122792941 5272 Eudicot View MSA
122044025 5273 Angiosperm View MSA
121345783 5274 Embryophyte View MSA
123424759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier