Gene : Brara.J02002 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10366:SF388 - CINNAMOYL COA REDUCTASE-LIKE PROTEIN Genomic Order:  2002
Name:  ? Brara.J02002 Secondary Identifier:  ? PAC:30611610
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-361 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02002 0.5kb upstream 0.5kb upstream 3410 true A10: 15765147-15768556 Brassica rapa FPsc
Brara.J02002 0.5kb upstream 0.5kb upstream 500 false A10: 15765147-15765646 Brassica rapa FPsc
Brara.J02002 0.5kb downstream 0.5kb downstream 3410 true A10: 15765647-15769056 Brassica rapa FPsc
Brara.J02002 0.5kb downstream 0.5kb downstream 500 false A10: 15768557-15769056 Brassica rapa FPsc
Brara.J02002 1.0kb upstream 1.0kb upstream 3910 true A10: 15764647-15768556 Brassica rapa FPsc
Brara.J02002 1.0kb upstream 1.0kb upstream 1000 false A10: 15764647-15765646 Brassica rapa FPsc
Brara.J02002 1.0kb downstream 1.0kb downstream 3910 true A10: 15765647-15769556 Brassica rapa FPsc
Brara.J02002 1.0kb downstream 1.0kb downstream 1000 false A10: 15768557-15769556 Brassica rapa FPsc
Brara.J02002 2.0kb upstream 2.0kb upstream 4910 true A10: 15763647-15768556 Brassica rapa FPsc
Brara.J02002 2.0kb upstream 2.0kb upstream 2000 false A10: 15763647-15765646 Brassica rapa FPsc
Brara.J02002 2.0kb downstream 2.0kb downstream 4910 true A10: 15765647-15770556 Brassica rapa FPsc
Brara.J02002 2.0kb downstream 2.0kb downstream 2000 false A10: 15768557-15770556 Brassica rapa FPsc
Brara.J02002 5.0kb upstream 5.0kb upstream 7910 true A10: 15760647-15768556 Brassica rapa FPsc
Brara.J02002 5.0kb upstream 5.0kb upstream 5000 false A10: 15760647-15765646 Brassica rapa FPsc
Brara.J02002 5.0kb downstream 5.0kb downstream 7910 true A10: 15765647-15773556 Brassica rapa FPsc
Brara.J02002 5.0kb downstream 5.0kb downstream 5000 false A10: 15768557-15773556 Brassica rapa FPsc
Brara.J02002 10.0kb upstream 10.0kb upstream 12910 true A10: 15755647-15768556 Brassica rapa FPsc
Brara.J02002 10.0kb upstream 10.0kb upstream 10000 false A10: 15755647-15765646 Brassica rapa FPsc
Brara.J02002 10.0kb downstream 10.0kb downstream 12910 true A10: 15765647-15778556 Brassica rapa FPsc
Brara.J02002 10.0kb downstream 10.0kb downstream 10000 false A10: 15768557-15778556 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380457 5261 Brassicaceae View MSA
123838997 5264 Brassicales-Malvales View MSA
124345323 5266 SBM View MSA
124236858 5268 Malvidae View MSA
124060434 5270 Rosid View MSA
123740788 5271 Pentapetalae View MSA
122786439 5272 Eudicot View MSA
122047901 5273 Angiosperm View MSA
121310812 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier