Gene : Brara.C01797 B. rapa FPsc v1.3
Defline:  (1 of 7) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase Genomic Order:  1797
Name:  ? Brara.C01797 Secondary Identifier:  ? PAC:30618491
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7238 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C01797 0.5kb upstream 0.5kb upstream 2691 true A03: 8802331-8805021 Brassica rapa FPsc
Brara.C01797 0.5kb upstream 0.5kb upstream 500 false A03: 8802331-8802830 Brassica rapa FPsc
Brara.C01797 0.5kb downstream 0.5kb downstream 2691 true A03: 8802831-8805521 Brassica rapa FPsc
Brara.C01797 0.5kb downstream 0.5kb downstream 500 false A03: 8805022-8805521 Brassica rapa FPsc
Brara.C01797 1.0kb upstream 1.0kb upstream 3191 true A03: 8801831-8805021 Brassica rapa FPsc
Brara.C01797 1.0kb upstream 1.0kb upstream 1000 false A03: 8801831-8802830 Brassica rapa FPsc
Brara.C01797 1.0kb downstream 1.0kb downstream 3191 true A03: 8802831-8806021 Brassica rapa FPsc
Brara.C01797 1.0kb downstream 1.0kb downstream 1000 false A03: 8805022-8806021 Brassica rapa FPsc
Brara.C01797 2.0kb upstream 2.0kb upstream 4191 true A03: 8800831-8805021 Brassica rapa FPsc
Brara.C01797 2.0kb upstream 2.0kb upstream 2000 false A03: 8800831-8802830 Brassica rapa FPsc
Brara.C01797 2.0kb downstream 2.0kb downstream 4191 true A03: 8802831-8807021 Brassica rapa FPsc
Brara.C01797 2.0kb downstream 2.0kb downstream 2000 false A03: 8805022-8807021 Brassica rapa FPsc
Brara.C01797 5.0kb upstream 5.0kb upstream 7191 true A03: 8797831-8805021 Brassica rapa FPsc
Brara.C01797 5.0kb upstream 5.0kb upstream 5000 false A03: 8797831-8802830 Brassica rapa FPsc
Brara.C01797 5.0kb downstream 5.0kb downstream 7191 true A03: 8802831-8810021 Brassica rapa FPsc
Brara.C01797 5.0kb downstream 5.0kb downstream 5000 false A03: 8805022-8810021 Brassica rapa FPsc
Brara.C01797 10.0kb upstream 10.0kb upstream 12191 true A03: 8792831-8805021 Brassica rapa FPsc
Brara.C01797 10.0kb upstream 10.0kb upstream 10000 false A03: 8792831-8802830 Brassica rapa FPsc
Brara.C01797 10.0kb downstream 10.0kb downstream 12191 true A03: 8802831-8815021 Brassica rapa FPsc
Brara.C01797 10.0kb downstream 10.0kb downstream 10000 false A03: 8805022-8815021 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347791 5261 Brassicaceae Singleton cluster - no MSA
123787257 5264 Brassicales-Malvales Singleton cluster - no MSA
124285339 5266 SBM Singleton cluster - no MSA
124250710 5268 Malvidae View MSA
124067868 5270 Rosid View MSA
123748054 5271 Pentapetalae View MSA
122788536 5272 Eudicot View MSA
122041652 5273 Angiosperm View MSA
123428930 5275 Viridiplantae View MSA
121349182 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier