Gene : Brara.J01783 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10992:SF217 - HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN Genomic Order:  1783
Name:  ? Brara.J01783 Secondary Identifier:  ? PAC:30613890
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5173 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PYRUVDEHYD-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01783 0.5kb upstream 0.5kb upstream 2087 true A10: 14735677-14737763 Brassica rapa FPsc
Brara.J01783 0.5kb upstream 0.5kb upstream 500 false A10: 14737264-14737763 Brassica rapa FPsc
Brara.J01783 0.5kb downstream 0.5kb downstream 2087 true A10: 14735177-14737263 Brassica rapa FPsc
Brara.J01783 0.5kb downstream 0.5kb downstream 500 false A10: 14735177-14735676 Brassica rapa FPsc
Brara.J01783 1.0kb upstream 1.0kb upstream 2587 true A10: 14735677-14738263 Brassica rapa FPsc
Brara.J01783 1.0kb upstream 1.0kb upstream 1000 false A10: 14737264-14738263 Brassica rapa FPsc
Brara.J01783 1.0kb downstream 1.0kb downstream 2587 true A10: 14734677-14737263 Brassica rapa FPsc
Brara.J01783 1.0kb downstream 1.0kb downstream 1000 false A10: 14734677-14735676 Brassica rapa FPsc
Brara.J01783 2.0kb upstream 2.0kb upstream 3587 true A10: 14735677-14739263 Brassica rapa FPsc
Brara.J01783 2.0kb upstream 2.0kb upstream 2000 false A10: 14737264-14739263 Brassica rapa FPsc
Brara.J01783 2.0kb downstream 2.0kb downstream 3587 true A10: 14733677-14737263 Brassica rapa FPsc
Brara.J01783 2.0kb downstream 2.0kb downstream 2000 false A10: 14733677-14735676 Brassica rapa FPsc
Brara.J01783 5.0kb upstream 5.0kb upstream 6587 true A10: 14735677-14742263 Brassica rapa FPsc
Brara.J01783 5.0kb upstream 5.0kb upstream 5000 false A10: 14737264-14742263 Brassica rapa FPsc
Brara.J01783 5.0kb downstream 5.0kb downstream 6587 true A10: 14730677-14737263 Brassica rapa FPsc
Brara.J01783 5.0kb downstream 5.0kb downstream 5000 false A10: 14730677-14735676 Brassica rapa FPsc
Brara.J01783 10.0kb upstream 10.0kb upstream 11587 true A10: 14735677-14747263 Brassica rapa FPsc
Brara.J01783 10.0kb upstream 10.0kb upstream 10000 false A10: 14737264-14747263 Brassica rapa FPsc
Brara.J01783 10.0kb downstream 10.0kb downstream 11587 true A10: 14725677-14737263 Brassica rapa FPsc
Brara.J01783 10.0kb downstream 10.0kb downstream 10000 false A10: 14725677-14735676 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380987 5261 Brassicaceae View MSA
123803000 5264 Brassicales-Malvales View MSA
124300143 5266 SBM View MSA
124151397 5268 Malvidae View MSA
124065025 5270 Rosid View MSA
123742866 5271 Pentapetalae View MSA
122790371 5272 Eudicot View MSA
122045603 5273 Angiosperm View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier