Gene : Brara.K01621 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11817:SF2 - PLASTIDIAL PYRUVATE KINASE 2 Genomic Order:  1
Name:  ? Brara.K01621 Secondary Identifier:  ? PAC:30646953
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01621 0.5kb upstream 0.5kb upstream 3004 true Scaffold7855: 33-3036 Brassica rapa FPsc
Brara.K01621 0.5kb upstream 0.5kb upstream 330 false Scaffold7855: 2707-3036 Brassica rapa FPsc
Brara.K01621 0.5kb downstream 0.5kb downstream 2706 true Scaffold7855: 1-2706 Brassica rapa FPsc
Brara.K01621 0.5kb downstream 0.5kb downstream 32 false Scaffold7855: 1-32 Brassica rapa FPsc
Brara.K01621 1.0kb upstream 1.0kb upstream 3004 true Scaffold7855: 33-3036 Brassica rapa FPsc
Brara.K01621 1.0kb upstream 1.0kb upstream 330 false Scaffold7855: 2707-3036 Brassica rapa FPsc
Brara.K01621 1.0kb downstream 1.0kb downstream 2706 true Scaffold7855: 1-2706 Brassica rapa FPsc
Brara.K01621 1.0kb downstream 1.0kb downstream 32 false Scaffold7855: 1-32 Brassica rapa FPsc
Brara.K01621 2.0kb upstream 2.0kb upstream 3004 true Scaffold7855: 33-3036 Brassica rapa FPsc
Brara.K01621 2.0kb upstream 2.0kb upstream 330 false Scaffold7855: 2707-3036 Brassica rapa FPsc
Brara.K01621 2.0kb downstream 2.0kb downstream 2706 true Scaffold7855: 1-2706 Brassica rapa FPsc
Brara.K01621 2.0kb downstream 2.0kb downstream 32 false Scaffold7855: 1-32 Brassica rapa FPsc
Brara.K01621 5.0kb upstream 5.0kb upstream 3004 true Scaffold7855: 33-3036 Brassica rapa FPsc
Brara.K01621 5.0kb upstream 5.0kb upstream 330 false Scaffold7855: 2707-3036 Brassica rapa FPsc
Brara.K01621 5.0kb downstream 5.0kb downstream 2706 true Scaffold7855: 1-2706 Brassica rapa FPsc
Brara.K01621 5.0kb downstream 5.0kb downstream 32 false Scaffold7855: 1-32 Brassica rapa FPsc
Brara.K01621 10.0kb upstream 10.0kb upstream 3004 true Scaffold7855: 33-3036 Brassica rapa FPsc
Brara.K01621 10.0kb upstream 10.0kb upstream 330 false Scaffold7855: 2707-3036 Brassica rapa FPsc
Brara.K01621 10.0kb downstream 10.0kb downstream 2706 true Scaffold7855: 1-2706 Brassica rapa FPsc
Brara.K01621 10.0kb downstream 10.0kb downstream 32 false Scaffold7855: 1-32 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360410 5261 Brassicaceae View MSA
123829680 5264 Brassicales-Malvales View MSA
124339790 5266 SBM View MSA
124238575 5268 Malvidae View MSA
124063008 5270 Rosid View MSA
123740915 5271 Pentapetalae View MSA
122789254 5272 Eudicot View MSA
122043860 5273 Angiosperm View MSA
121350965 5274 Embryophyte View MSA
123423965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier