Gene : Brara.K01881 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR10168:SF14 - GLUTAREDOXIN-C5, CHLOROPLASTIC-RELATED Genomic Order:  14
Name:  ? Brara.K01881 Secondary Identifier:  ? PAC:30611149
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01881 0.5kb upstream 0.5kb upstream 1827 true Scaffold8989: 89729-91555 Brassica rapa FPsc
Brara.K01881 0.5kb upstream 0.5kb upstream 500 false Scaffold8989: 91056-91555 Brassica rapa FPsc
Brara.K01881 0.5kb downstream 0.5kb downstream 1827 true Scaffold8989: 89229-91055 Brassica rapa FPsc
Brara.K01881 0.5kb downstream 0.5kb downstream 500 false Scaffold8989: 89229-89728 Brassica rapa FPsc
Brara.K01881 1.0kb upstream 1.0kb upstream 2327 true Scaffold8989: 89729-92055 Brassica rapa FPsc
Brara.K01881 1.0kb upstream 1.0kb upstream 1000 false Scaffold8989: 91056-92055 Brassica rapa FPsc
Brara.K01881 1.0kb downstream 1.0kb downstream 2327 true Scaffold8989: 88729-91055 Brassica rapa FPsc
Brara.K01881 1.0kb downstream 1.0kb downstream 1000 false Scaffold8989: 88729-89728 Brassica rapa FPsc
Brara.K01881 2.0kb upstream 2.0kb upstream 3327 true Scaffold8989: 89729-93055 Brassica rapa FPsc
Brara.K01881 2.0kb upstream 2.0kb upstream 2000 false Scaffold8989: 91056-93055 Brassica rapa FPsc
Brara.K01881 2.0kb downstream 2.0kb downstream 3327 true Scaffold8989: 87729-91055 Brassica rapa FPsc
Brara.K01881 2.0kb downstream 2.0kb downstream 2000 false Scaffold8989: 87729-89728 Brassica rapa FPsc
Brara.K01881 5.0kb upstream 5.0kb upstream 6327 true Scaffold8989: 89729-96055 Brassica rapa FPsc
Brara.K01881 5.0kb upstream 5.0kb upstream 5000 false Scaffold8989: 91056-96055 Brassica rapa FPsc
Brara.K01881 5.0kb downstream 5.0kb downstream 6327 true Scaffold8989: 84729-91055 Brassica rapa FPsc
Brara.K01881 5.0kb downstream 5.0kb downstream 5000 false Scaffold8989: 84729-89728 Brassica rapa FPsc
Brara.K01881 10.0kb upstream 10.0kb upstream 11327 true Scaffold8989: 89729-101055 Brassica rapa FPsc
Brara.K01881 10.0kb upstream 10.0kb upstream 10000 false Scaffold8989: 91056-101055 Brassica rapa FPsc
Brara.K01881 10.0kb downstream 10.0kb downstream 11327 true Scaffold8989: 79729-91055 Brassica rapa FPsc
Brara.K01881 10.0kb downstream 10.0kb downstream 10000 false Scaffold8989: 79729-89728 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026565 5273 Angiosperm View MSA
122378106 5261 Brassicaceae View MSA
123827749 5264 Brassicales-Malvales View MSA
124341249 5266 SBM View MSA
124252514 5268 Malvidae View MSA
124066843 5270 Rosid View MSA
123737863 5271 Pentapetalae View MSA
122787960 5272 Eudicot View MSA
121350843 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier