Gene : Brara.J02894 B. rapa FPsc v1.3
Defline:  (1 of 9) 3.1.3.74 - Pyridoxal phosphatase / Vitamin B6-phosphate phosphatase Genomic Order:  2894
Name:  ? Brara.J02894 Secondary Identifier:  ? PAC:30612152
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7204 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02894 0.5kb upstream 0.5kb upstream 2680 true A10: 19678255-19680934 Brassica rapa FPsc
Brara.J02894 0.5kb upstream 0.5kb upstream 500 false A10: 19680435-19680934 Brassica rapa FPsc
Brara.J02894 0.5kb downstream 0.5kb downstream 2680 true A10: 19677755-19680434 Brassica rapa FPsc
Brara.J02894 0.5kb downstream 0.5kb downstream 500 false A10: 19677755-19678254 Brassica rapa FPsc
Brara.J02894 1.0kb upstream 1.0kb upstream 3180 true A10: 19678255-19681434 Brassica rapa FPsc
Brara.J02894 1.0kb upstream 1.0kb upstream 1000 false A10: 19680435-19681434 Brassica rapa FPsc
Brara.J02894 1.0kb downstream 1.0kb downstream 3180 true A10: 19677255-19680434 Brassica rapa FPsc
Brara.J02894 1.0kb downstream 1.0kb downstream 1000 false A10: 19677255-19678254 Brassica rapa FPsc
Brara.J02894 2.0kb upstream 2.0kb upstream 4180 true A10: 19678255-19682434 Brassica rapa FPsc
Brara.J02894 2.0kb upstream 2.0kb upstream 2000 false A10: 19680435-19682434 Brassica rapa FPsc
Brara.J02894 2.0kb downstream 2.0kb downstream 4180 true A10: 19676255-19680434 Brassica rapa FPsc
Brara.J02894 2.0kb downstream 2.0kb downstream 2000 false A10: 19676255-19678254 Brassica rapa FPsc
Brara.J02894 5.0kb upstream 5.0kb upstream 7180 true A10: 19678255-19685434 Brassica rapa FPsc
Brara.J02894 5.0kb upstream 5.0kb upstream 5000 false A10: 19680435-19685434 Brassica rapa FPsc
Brara.J02894 5.0kb downstream 5.0kb downstream 7180 true A10: 19673255-19680434 Brassica rapa FPsc
Brara.J02894 5.0kb downstream 5.0kb downstream 5000 false A10: 19673255-19678254 Brassica rapa FPsc
Brara.J02894 10.0kb upstream 10.0kb upstream 12180 true A10: 19678255-19690434 Brassica rapa FPsc
Brara.J02894 10.0kb upstream 10.0kb upstream 10000 false A10: 19680435-19690434 Brassica rapa FPsc
Brara.J02894 10.0kb downstream 10.0kb downstream 12180 true A10: 19668255-19680434 Brassica rapa FPsc
Brara.J02894 10.0kb downstream 10.0kb downstream 10000 false A10: 19668255-19678254 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346113 5261 Brassicaceae Singleton cluster - no MSA
123785852 5264 Brassicales-Malvales Singleton cluster - no MSA
124350417 5266 SBM View MSA
124254189 5268 Malvidae View MSA
124070818 5270 Rosid View MSA
123749879 5271 Pentapetalae View MSA
122794790 5272 Eudicot View MSA
122045450 5273 Angiosperm View MSA
121348248 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier