Gene : Brara.E03101 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR11709:SF9 - LACCASE-7-RELATED Genomic Order:  3101
Name:  ? Brara.E03101 Secondary Identifier:  ? PAC:30627207
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03101 0.5kb upstream 0.5kb upstream 7687 true A05: 25619683-25627369 Brassica rapa FPsc
Brara.E03101 0.5kb upstream 0.5kb upstream 500 false A05: 25619683-25620182 Brassica rapa FPsc
Brara.E03101 0.5kb downstream 0.5kb downstream 7687 true A05: 25620183-25627869 Brassica rapa FPsc
Brara.E03101 0.5kb downstream 0.5kb downstream 500 false A05: 25627370-25627869 Brassica rapa FPsc
Brara.E03101 1.0kb upstream 1.0kb upstream 8187 true A05: 25619183-25627369 Brassica rapa FPsc
Brara.E03101 1.0kb upstream 1.0kb upstream 1000 false A05: 25619183-25620182 Brassica rapa FPsc
Brara.E03101 1.0kb downstream 1.0kb downstream 8187 true A05: 25620183-25628369 Brassica rapa FPsc
Brara.E03101 1.0kb downstream 1.0kb downstream 1000 false A05: 25627370-25628369 Brassica rapa FPsc
Brara.E03101 2.0kb upstream 2.0kb upstream 9187 true A05: 25618183-25627369 Brassica rapa FPsc
Brara.E03101 2.0kb upstream 2.0kb upstream 2000 false A05: 25618183-25620182 Brassica rapa FPsc
Brara.E03101 2.0kb downstream 2.0kb downstream 9187 true A05: 25620183-25629369 Brassica rapa FPsc
Brara.E03101 2.0kb downstream 2.0kb downstream 2000 false A05: 25627370-25629369 Brassica rapa FPsc
Brara.E03101 5.0kb upstream 5.0kb upstream 12187 true A05: 25615183-25627369 Brassica rapa FPsc
Brara.E03101 5.0kb upstream 5.0kb upstream 5000 false A05: 25615183-25620182 Brassica rapa FPsc
Brara.E03101 5.0kb downstream 5.0kb downstream 12187 true A05: 25620183-25632369 Brassica rapa FPsc
Brara.E03101 5.0kb downstream 5.0kb downstream 5000 false A05: 25627370-25632369 Brassica rapa FPsc
Brara.E03101 10.0kb upstream 10.0kb upstream 17187 true A05: 25610183-25627369 Brassica rapa FPsc
Brara.E03101 10.0kb upstream 10.0kb upstream 10000 false A05: 25610183-25620182 Brassica rapa FPsc
Brara.E03101 10.0kb downstream 10.0kb downstream 17187 true A05: 25620183-25637369 Brassica rapa FPsc
Brara.E03101 10.0kb downstream 10.0kb downstream 10000 false A05: 25627370-25637369 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365936 5261 Brassicaceae View MSA
123835955 5264 Brassicales-Malvales View MSA
124351381 5266 SBM View MSA
124241371 5268 Malvidae View MSA
124063010 5270 Rosid View MSA
123744163 5271 Pentapetalae View MSA
122787244 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier