Gene : Brara.C02450 B. rapa FPsc v1.3
Defline:  (1 of 2) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  2450
Name:  ? Brara.C02450 Secondary Identifier:  ? PAC:30619114
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LEU-DEG2-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02450 0.5kb upstream 0.5kb upstream 3163 true A03: 12304886-12308048 Brassica rapa FPsc
Brara.C02450 0.5kb upstream 0.5kb upstream 500 false A03: 12304886-12305385 Brassica rapa FPsc
Brara.C02450 0.5kb downstream 0.5kb downstream 3163 true A03: 12305386-12308548 Brassica rapa FPsc
Brara.C02450 0.5kb downstream 0.5kb downstream 500 false A03: 12308049-12308548 Brassica rapa FPsc
Brara.C02450 1.0kb upstream 1.0kb upstream 3663 true A03: 12304386-12308048 Brassica rapa FPsc
Brara.C02450 1.0kb upstream 1.0kb upstream 1000 false A03: 12304386-12305385 Brassica rapa FPsc
Brara.C02450 1.0kb downstream 1.0kb downstream 3663 true A03: 12305386-12309048 Brassica rapa FPsc
Brara.C02450 1.0kb downstream 1.0kb downstream 1000 false A03: 12308049-12309048 Brassica rapa FPsc
Brara.C02450 2.0kb upstream 2.0kb upstream 4663 true A03: 12303386-12308048 Brassica rapa FPsc
Brara.C02450 2.0kb upstream 2.0kb upstream 2000 false A03: 12303386-12305385 Brassica rapa FPsc
Brara.C02450 2.0kb downstream 2.0kb downstream 4663 true A03: 12305386-12310048 Brassica rapa FPsc
Brara.C02450 2.0kb downstream 2.0kb downstream 2000 false A03: 12308049-12310048 Brassica rapa FPsc
Brara.C02450 5.0kb upstream 5.0kb upstream 7663 true A03: 12300386-12308048 Brassica rapa FPsc
Brara.C02450 5.0kb upstream 5.0kb upstream 5000 false A03: 12300386-12305385 Brassica rapa FPsc
Brara.C02450 5.0kb downstream 5.0kb downstream 7663 true A03: 12305386-12313048 Brassica rapa FPsc
Brara.C02450 5.0kb downstream 5.0kb downstream 5000 false A03: 12308049-12313048 Brassica rapa FPsc
Brara.C02450 10.0kb upstream 10.0kb upstream 12663 true A03: 12295386-12308048 Brassica rapa FPsc
Brara.C02450 10.0kb upstream 10.0kb upstream 10000 false A03: 12295386-12305385 Brassica rapa FPsc
Brara.C02450 10.0kb downstream 10.0kb downstream 12663 true A03: 12305386-12318048 Brassica rapa FPsc
Brara.C02450 10.0kb downstream 10.0kb downstream 10000 false A03: 12308049-12318048 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364667 5261 Brassicaceae View MSA
123834510 5264 Brassicales-Malvales View MSA
124345181 5266 SBM View MSA
124245610 5268 Malvidae View MSA
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier