Gene : Brara.J02514 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR31321:SF23 - PECTINESTERASE PPME1-RELATED Genomic Order:  2514
Name:  ? Brara.J02514 Secondary Identifier:  ? PAC:30614239
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02514 0.5kb upstream 0.5kb upstream 2424 true A10: 18046251-18048674 Brassica rapa FPsc
Brara.J02514 0.5kb upstream 0.5kb upstream 500 false A10: 18046251-18046750 Brassica rapa FPsc
Brara.J02514 0.5kb downstream 0.5kb downstream 2424 true A10: 18046751-18049174 Brassica rapa FPsc
Brara.J02514 0.5kb downstream 0.5kb downstream 500 false A10: 18048675-18049174 Brassica rapa FPsc
Brara.J02514 1.0kb upstream 1.0kb upstream 2924 true A10: 18045751-18048674 Brassica rapa FPsc
Brara.J02514 1.0kb upstream 1.0kb upstream 1000 false A10: 18045751-18046750 Brassica rapa FPsc
Brara.J02514 1.0kb downstream 1.0kb downstream 2924 true A10: 18046751-18049674 Brassica rapa FPsc
Brara.J02514 1.0kb downstream 1.0kb downstream 1000 false A10: 18048675-18049674 Brassica rapa FPsc
Brara.J02514 2.0kb upstream 2.0kb upstream 3924 true A10: 18044751-18048674 Brassica rapa FPsc
Brara.J02514 2.0kb upstream 2.0kb upstream 2000 false A10: 18044751-18046750 Brassica rapa FPsc
Brara.J02514 2.0kb downstream 2.0kb downstream 3924 true A10: 18046751-18050674 Brassica rapa FPsc
Brara.J02514 2.0kb downstream 2.0kb downstream 2000 false A10: 18048675-18050674 Brassica rapa FPsc
Brara.J02514 5.0kb upstream 5.0kb upstream 6924 true A10: 18041751-18048674 Brassica rapa FPsc
Brara.J02514 5.0kb upstream 5.0kb upstream 5000 false A10: 18041751-18046750 Brassica rapa FPsc
Brara.J02514 5.0kb downstream 5.0kb downstream 6924 true A10: 18046751-18053674 Brassica rapa FPsc
Brara.J02514 5.0kb downstream 5.0kb downstream 5000 false A10: 18048675-18053674 Brassica rapa FPsc
Brara.J02514 10.0kb upstream 10.0kb upstream 11924 true A10: 18036751-18048674 Brassica rapa FPsc
Brara.J02514 10.0kb upstream 10.0kb upstream 10000 false A10: 18036751-18046750 Brassica rapa FPsc
Brara.J02514 10.0kb downstream 10.0kb downstream 11924 true A10: 18046751-18058674 Brassica rapa FPsc
Brara.J02514 10.0kb downstream 10.0kb downstream 10000 false A10: 18048675-18058674 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372248 5261 Brassicaceae View MSA
123841334 5264 Brassicales-Malvales View MSA
124322903 5266 SBM View MSA
124253324 5268 Malvidae View MSA
124071696 5270 Rosid View MSA
123740013 5271 Pentapetalae View MSA
122792940 5272 Eudicot View MSA
122051382 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier