Gene : Brara.C02198 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Genomic Order:  2198
Name:  ? Brara.C02198 Secondary Identifier:  ? PAC:30615402
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc DETOX1-PWY-1 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02198 0.5kb upstream 0.5kb upstream 2376 true A03: 11018091-11020466 Brassica rapa FPsc
Brara.C02198 0.5kb upstream 0.5kb upstream 500 false A03: 11019967-11020466 Brassica rapa FPsc
Brara.C02198 0.5kb downstream 0.5kb downstream 2376 true A03: 11017591-11019966 Brassica rapa FPsc
Brara.C02198 0.5kb downstream 0.5kb downstream 500 false A03: 11017591-11018090 Brassica rapa FPsc
Brara.C02198 1.0kb upstream 1.0kb upstream 2876 true A03: 11018091-11020966 Brassica rapa FPsc
Brara.C02198 1.0kb upstream 1.0kb upstream 1000 false A03: 11019967-11020966 Brassica rapa FPsc
Brara.C02198 1.0kb downstream 1.0kb downstream 2876 true A03: 11017091-11019966 Brassica rapa FPsc
Brara.C02198 1.0kb downstream 1.0kb downstream 1000 false A03: 11017091-11018090 Brassica rapa FPsc
Brara.C02198 2.0kb upstream 2.0kb upstream 3876 true A03: 11018091-11021966 Brassica rapa FPsc
Brara.C02198 2.0kb upstream 2.0kb upstream 2000 false A03: 11019967-11021966 Brassica rapa FPsc
Brara.C02198 2.0kb downstream 2.0kb downstream 3876 true A03: 11016091-11019966 Brassica rapa FPsc
Brara.C02198 2.0kb downstream 2.0kb downstream 2000 false A03: 11016091-11018090 Brassica rapa FPsc
Brara.C02198 5.0kb upstream 5.0kb upstream 6876 true A03: 11018091-11024966 Brassica rapa FPsc
Brara.C02198 5.0kb upstream 5.0kb upstream 5000 false A03: 11019967-11024966 Brassica rapa FPsc
Brara.C02198 5.0kb downstream 5.0kb downstream 6876 true A03: 11013091-11019966 Brassica rapa FPsc
Brara.C02198 5.0kb downstream 5.0kb downstream 5000 false A03: 11013091-11018090 Brassica rapa FPsc
Brara.C02198 10.0kb upstream 10.0kb upstream 11876 true A03: 11018091-11029966 Brassica rapa FPsc
Brara.C02198 10.0kb upstream 10.0kb upstream 10000 false A03: 11019967-11029966 Brassica rapa FPsc
Brara.C02198 10.0kb downstream 10.0kb downstream 11876 true A03: 11008091-11019966 Brassica rapa FPsc
Brara.C02198 10.0kb downstream 10.0kb downstream 10000 false A03: 11008091-11018090 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361167 5261 Brassicaceae View MSA
123839339 5264 Brassicales-Malvales View MSA
124341945 5266 SBM View MSA
124254095 5268 Malvidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier