Gene : Brara.C02199 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR22976 - BIOTIN SYNTHASE Genomic Order:  2199
Name:  ? Brara.C02199 Secondary Identifier:  ? PAC:30618184
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-1507 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02199 0.5kb upstream 0.5kb upstream 2717 true A03: 11020067-11022783 Brassica rapa FPsc
Brara.C02199 0.5kb upstream 0.5kb upstream 500 false A03: 11022284-11022783 Brassica rapa FPsc
Brara.C02199 0.5kb downstream 0.5kb downstream 2717 true A03: 11019567-11022283 Brassica rapa FPsc
Brara.C02199 0.5kb downstream 0.5kb downstream 500 false A03: 11019567-11020066 Brassica rapa FPsc
Brara.C02199 1.0kb upstream 1.0kb upstream 3217 true A03: 11020067-11023283 Brassica rapa FPsc
Brara.C02199 1.0kb upstream 1.0kb upstream 1000 false A03: 11022284-11023283 Brassica rapa FPsc
Brara.C02199 1.0kb downstream 1.0kb downstream 3217 true A03: 11019067-11022283 Brassica rapa FPsc
Brara.C02199 1.0kb downstream 1.0kb downstream 1000 false A03: 11019067-11020066 Brassica rapa FPsc
Brara.C02199 2.0kb upstream 2.0kb upstream 4217 true A03: 11020067-11024283 Brassica rapa FPsc
Brara.C02199 2.0kb upstream 2.0kb upstream 2000 false A03: 11022284-11024283 Brassica rapa FPsc
Brara.C02199 2.0kb downstream 2.0kb downstream 4217 true A03: 11018067-11022283 Brassica rapa FPsc
Brara.C02199 2.0kb downstream 2.0kb downstream 2000 false A03: 11018067-11020066 Brassica rapa FPsc
Brara.C02199 5.0kb upstream 5.0kb upstream 7217 true A03: 11020067-11027283 Brassica rapa FPsc
Brara.C02199 5.0kb upstream 5.0kb upstream 5000 false A03: 11022284-11027283 Brassica rapa FPsc
Brara.C02199 5.0kb downstream 5.0kb downstream 7217 true A03: 11015067-11022283 Brassica rapa FPsc
Brara.C02199 5.0kb downstream 5.0kb downstream 5000 false A03: 11015067-11020066 Brassica rapa FPsc
Brara.C02199 10.0kb upstream 10.0kb upstream 12217 true A03: 11020067-11032283 Brassica rapa FPsc
Brara.C02199 10.0kb upstream 10.0kb upstream 10000 false A03: 11022284-11032283 Brassica rapa FPsc
Brara.C02199 10.0kb downstream 10.0kb downstream 12217 true A03: 11010067-11022283 Brassica rapa FPsc
Brara.C02199 10.0kb downstream 10.0kb downstream 10000 false A03: 11010067-11020066 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362825 5261 Brassicaceae View MSA
123834542 5264 Brassicales-Malvales View MSA
124350234 5266 SBM View MSA
124240985 5268 Malvidae View MSA
124069050 5270 Rosid View MSA
123738436 5271 Pentapetalae View MSA
122791352 5272 Eudicot View MSA
122044097 5273 Angiosperm View MSA
121346101 5274 Embryophyte View MSA
123424620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier