Gene : Brara.J02435 B. rapa FPsc v1.3
Defline:  (1 of 6) 6.2.1.5 - Succinate--CoA ligase (ADP-forming) / Succinyl-CoA synthetase (ADP-forming) Genomic Order:  2435
Name:  ? Brara.J02435 Secondary Identifier:  ? PAC:30614469
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02435 0.5kb upstream 0.5kb upstream 2938 true A10: 17675229-17678166 Brassica rapa FPsc
Brara.J02435 0.5kb upstream 0.5kb upstream 500 false A10: 17677667-17678166 Brassica rapa FPsc
Brara.J02435 0.5kb downstream 0.5kb downstream 2938 true A10: 17674729-17677666 Brassica rapa FPsc
Brara.J02435 0.5kb downstream 0.5kb downstream 500 false A10: 17674729-17675228 Brassica rapa FPsc
Brara.J02435 1.0kb upstream 1.0kb upstream 3438 true A10: 17675229-17678666 Brassica rapa FPsc
Brara.J02435 1.0kb upstream 1.0kb upstream 1000 false A10: 17677667-17678666 Brassica rapa FPsc
Brara.J02435 1.0kb downstream 1.0kb downstream 3438 true A10: 17674229-17677666 Brassica rapa FPsc
Brara.J02435 1.0kb downstream 1.0kb downstream 1000 false A10: 17674229-17675228 Brassica rapa FPsc
Brara.J02435 2.0kb upstream 2.0kb upstream 4438 true A10: 17675229-17679666 Brassica rapa FPsc
Brara.J02435 2.0kb upstream 2.0kb upstream 2000 false A10: 17677667-17679666 Brassica rapa FPsc
Brara.J02435 2.0kb downstream 2.0kb downstream 4438 true A10: 17673229-17677666 Brassica rapa FPsc
Brara.J02435 2.0kb downstream 2.0kb downstream 2000 false A10: 17673229-17675228 Brassica rapa FPsc
Brara.J02435 5.0kb upstream 5.0kb upstream 7438 true A10: 17675229-17682666 Brassica rapa FPsc
Brara.J02435 5.0kb upstream 5.0kb upstream 5000 false A10: 17677667-17682666 Brassica rapa FPsc
Brara.J02435 5.0kb downstream 5.0kb downstream 7438 true A10: 17670229-17677666 Brassica rapa FPsc
Brara.J02435 5.0kb downstream 5.0kb downstream 5000 false A10: 17670229-17675228 Brassica rapa FPsc
Brara.J02435 10.0kb upstream 10.0kb upstream 12438 true A10: 17675229-17687666 Brassica rapa FPsc
Brara.J02435 10.0kb upstream 10.0kb upstream 10000 false A10: 17677667-17687666 Brassica rapa FPsc
Brara.J02435 10.0kb downstream 10.0kb downstream 12438 true A10: 17665229-17677666 Brassica rapa FPsc
Brara.J02435 10.0kb downstream 10.0kb downstream 10000 false A10: 17665229-17675228 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366711 5261 Brassicaceae View MSA
123837758 5264 Brassicales-Malvales View MSA
124342253 5266 SBM View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier