Gene : Brara.K01115 B. rapa FPsc v1.3
Defline:  (1 of 5) 6.6.1.1 - Magnesium chelatase / Protoporphyrin IX Mg-chelatase Genomic Order:  1
Name:  ? Brara.K01115 Secondary Identifier:  ? PAC:30627412
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CHLOROPHYLL-SYN Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01115 0.5kb upstream 0.5kb upstream 1981 true Scaffold48712: 1549-3529 Brassica rapa FPsc
Brara.K01115 0.5kb upstream 0.5kb upstream 500 false Scaffold48712: 1549-2048 Brassica rapa FPsc
Brara.K01115 0.5kb downstream 0.5kb downstream 1981 true Scaffold48712: 2049-4029 Brassica rapa FPsc
Brara.K01115 0.5kb downstream 0.5kb downstream 500 false Scaffold48712: 3530-4029 Brassica rapa FPsc
Brara.K01115 1.0kb upstream 1.0kb upstream 2481 true Scaffold48712: 1049-3529 Brassica rapa FPsc
Brara.K01115 1.0kb upstream 1.0kb upstream 1000 false Scaffold48712: 1049-2048 Brassica rapa FPsc
Brara.K01115 1.0kb downstream 1.0kb downstream 2481 true Scaffold48712: 2049-4529 Brassica rapa FPsc
Brara.K01115 1.0kb downstream 1.0kb downstream 1000 false Scaffold48712: 3530-4529 Brassica rapa FPsc
Brara.K01115 2.0kb upstream 2.0kb upstream 3481 true Scaffold48712: 49-3529 Brassica rapa FPsc
Brara.K01115 2.0kb upstream 2.0kb upstream 2000 false Scaffold48712: 49-2048 Brassica rapa FPsc
Brara.K01115 2.0kb downstream 2.0kb downstream 3481 true Scaffold48712: 2049-5529 Brassica rapa FPsc
Brara.K01115 2.0kb downstream 2.0kb downstream 2000 false Scaffold48712: 3530-5529 Brassica rapa FPsc
Brara.K01115 5.0kb upstream 5.0kb upstream 3529 true Scaffold48712: 1-3529 Brassica rapa FPsc
Brara.K01115 5.0kb upstream 5.0kb upstream 2048 false Scaffold48712: 1-2048 Brassica rapa FPsc
Brara.K01115 5.0kb downstream 5.0kb downstream 6481 true Scaffold48712: 2049-8529 Brassica rapa FPsc
Brara.K01115 5.0kb downstream 5.0kb downstream 5000 false Scaffold48712: 3530-8529 Brassica rapa FPsc
Brara.K01115 10.0kb upstream 10.0kb upstream 3529 true Scaffold48712: 1-3529 Brassica rapa FPsc
Brara.K01115 10.0kb upstream 10.0kb upstream 2048 false Scaffold48712: 1-2048 Brassica rapa FPsc
Brara.K01115 10.0kb downstream 10.0kb downstream 7934 true Scaffold48712: 2049-9982 Brassica rapa FPsc
Brara.K01115 10.0kb downstream 10.0kb downstream 6453 false Scaffold48712: 3530-9982 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026298 5273 Angiosperm View MSA
122364037 5261 Brassicaceae View MSA
123838175 5264 Brassicales-Malvales View MSA
124343435 5266 SBM View MSA
124251602 5268 Malvidae View MSA
124063666 5270 Rosid View MSA
123736903 5271 Pentapetalae View MSA
122790961 5272 Eudicot View MSA
121346302 5274 Embryophyte View MSA
123426232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier