Gene : Brara.K00934 B. rapa FPsc v1.3
Defline:  (1 of 47) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1
Name:  ? Brara.K00934 Secondary Identifier:  ? PAC:30606615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00934 0.5kb upstream 0.5kb upstream 3400 true Scaffold32557: 2594-5993 Brassica rapa FPsc
Brara.K00934 0.5kb upstream 0.5kb upstream 500 false Scaffold32557: 2594-3093 Brassica rapa FPsc
Brara.K00934 0.5kb downstream 0.5kb downstream 3400 true Scaffold32557: 3094-6493 Brassica rapa FPsc
Brara.K00934 0.5kb downstream 0.5kb downstream 500 false Scaffold32557: 5994-6493 Brassica rapa FPsc
Brara.K00934 1.0kb upstream 1.0kb upstream 3900 true Scaffold32557: 2094-5993 Brassica rapa FPsc
Brara.K00934 1.0kb upstream 1.0kb upstream 1000 false Scaffold32557: 2094-3093 Brassica rapa FPsc
Brara.K00934 1.0kb downstream 1.0kb downstream 3900 true Scaffold32557: 3094-6993 Brassica rapa FPsc
Brara.K00934 1.0kb downstream 1.0kb downstream 1000 false Scaffold32557: 5994-6993 Brassica rapa FPsc
Brara.K00934 2.0kb upstream 2.0kb upstream 4900 true Scaffold32557: 1094-5993 Brassica rapa FPsc
Brara.K00934 2.0kb upstream 2.0kb upstream 2000 false Scaffold32557: 1094-3093 Brassica rapa FPsc
Brara.K00934 2.0kb downstream 2.0kb downstream 4900 true Scaffold32557: 3094-7993 Brassica rapa FPsc
Brara.K00934 2.0kb downstream 2.0kb downstream 2000 false Scaffold32557: 5994-7993 Brassica rapa FPsc
Brara.K00934 5.0kb upstream 5.0kb upstream 5993 true Scaffold32557: 1-5993 Brassica rapa FPsc
Brara.K00934 5.0kb upstream 5.0kb upstream 3093 false Scaffold32557: 1-3093 Brassica rapa FPsc
Brara.K00934 5.0kb downstream 5.0kb downstream 6944 true Scaffold32557: 3094-10037 Brassica rapa FPsc
Brara.K00934 5.0kb downstream 5.0kb downstream 4044 false Scaffold32557: 5994-10037 Brassica rapa FPsc
Brara.K00934 10.0kb upstream 10.0kb upstream 5993 true Scaffold32557: 1-5993 Brassica rapa FPsc
Brara.K00934 10.0kb upstream 10.0kb upstream 3093 false Scaffold32557: 1-3093 Brassica rapa FPsc
Brara.K00934 10.0kb downstream 10.0kb downstream 6944 true Scaffold32557: 3094-10037 Brassica rapa FPsc
Brara.K00934 10.0kb downstream 10.0kb downstream 4044 false Scaffold32557: 5994-10037 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380064 5261 Brassicaceae View MSA
123802541 5264 Brassicales-Malvales View MSA
124299729 5266 SBM View MSA
124255746 5268 Malvidae View MSA
124051474 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier