Gene : Brara.K00772 B. rapa FPsc v1.3
Defline:  (1 of 13) PF02689//PF05970//PF14214 - Helicase (Herpes_Helicase) // PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  1
Name:  ? Brara.K00772 Secondary Identifier:  ? PAC:30614866
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00772 0.5kb upstream 0.5kb upstream 5665 true Scaffold27046: 758-6422 Brassica rapa FPsc
Brara.K00772 0.5kb upstream 0.5kb upstream 500 false Scaffold27046: 758-1257 Brassica rapa FPsc
Brara.K00772 0.5kb downstream 0.5kb downstream 5665 true Scaffold27046: 1258-6922 Brassica rapa FPsc
Brara.K00772 0.5kb downstream 0.5kb downstream 500 false Scaffold27046: 6423-6922 Brassica rapa FPsc
Brara.K00772 1.0kb upstream 1.0kb upstream 6165 true Scaffold27046: 258-6422 Brassica rapa FPsc
Brara.K00772 1.0kb upstream 1.0kb upstream 1000 false Scaffold27046: 258-1257 Brassica rapa FPsc
Brara.K00772 1.0kb downstream 1.0kb downstream 6165 true Scaffold27046: 1258-7422 Brassica rapa FPsc
Brara.K00772 1.0kb downstream 1.0kb downstream 1000 false Scaffold27046: 6423-7422 Brassica rapa FPsc
Brara.K00772 2.0kb upstream 2.0kb upstream 6422 true Scaffold27046: 1-6422 Brassica rapa FPsc
Brara.K00772 2.0kb upstream 2.0kb upstream 1257 false Scaffold27046: 1-1257 Brassica rapa FPsc
Brara.K00772 2.0kb downstream 2.0kb downstream 6391 true Scaffold27046: 1258-7648 Brassica rapa FPsc
Brara.K00772 2.0kb downstream 2.0kb downstream 1226 false Scaffold27046: 6423-7648 Brassica rapa FPsc
Brara.K00772 5.0kb upstream 5.0kb upstream 6422 true Scaffold27046: 1-6422 Brassica rapa FPsc
Brara.K00772 5.0kb upstream 5.0kb upstream 1257 false Scaffold27046: 1-1257 Brassica rapa FPsc
Brara.K00772 5.0kb downstream 5.0kb downstream 6391 true Scaffold27046: 1258-7648 Brassica rapa FPsc
Brara.K00772 5.0kb downstream 5.0kb downstream 1226 false Scaffold27046: 6423-7648 Brassica rapa FPsc
Brara.K00772 10.0kb upstream 10.0kb upstream 6422 true Scaffold27046: 1-6422 Brassica rapa FPsc
Brara.K00772 10.0kb upstream 10.0kb upstream 1257 false Scaffold27046: 1-1257 Brassica rapa FPsc
Brara.K00772 10.0kb downstream 10.0kb downstream 6391 true Scaffold27046: 1258-7648 Brassica rapa FPsc
Brara.K00772 10.0kb downstream 10.0kb downstream 1226 false Scaffold27046: 6423-7648 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122355945 5261 Brassicaceae View MSA
123794108 5264 Brassicales-Malvales View MSA
124350527 5266 SBM View MSA
124252774 5268 Malvidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier