Gene : Brara.K00800 B. rapa FPsc v1.3
Defline:  (1 of 16) PTHR22835:SF184 - GDSL ESTERASE/LIPASE EXL1-RELATED Genomic Order:  3
Name:  ? Brara.K00800 Secondary Identifier:  ? PAC:30606591
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPAS-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00800 0.5kb upstream 0.5kb upstream 2676 true Scaffold30042: 5808-8483 Brassica rapa FPsc
Brara.K00800 0.5kb upstream 0.5kb upstream 500 false Scaffold30042: 5808-6307 Brassica rapa FPsc
Brara.K00800 0.5kb downstream 0.5kb downstream 2676 true Scaffold30042: 6308-8983 Brassica rapa FPsc
Brara.K00800 0.5kb downstream 0.5kb downstream 500 false Scaffold30042: 8484-8983 Brassica rapa FPsc
Brara.K00800 1.0kb upstream 1.0kb upstream 3176 true Scaffold30042: 5308-8483 Brassica rapa FPsc
Brara.K00800 1.0kb upstream 1.0kb upstream 1000 false Scaffold30042: 5308-6307 Brassica rapa FPsc
Brara.K00800 1.0kb downstream 1.0kb downstream 3176 true Scaffold30042: 6308-9483 Brassica rapa FPsc
Brara.K00800 1.0kb downstream 1.0kb downstream 1000 false Scaffold30042: 8484-9483 Brassica rapa FPsc
Brara.K00800 2.0kb upstream 2.0kb upstream 4176 true Scaffold30042: 4308-8483 Brassica rapa FPsc
Brara.K00800 2.0kb upstream 2.0kb upstream 2000 false Scaffold30042: 4308-6307 Brassica rapa FPsc
Brara.K00800 2.0kb downstream 2.0kb downstream 4176 true Scaffold30042: 6308-10483 Brassica rapa FPsc
Brara.K00800 2.0kb downstream 2.0kb downstream 2000 false Scaffold30042: 8484-10483 Brassica rapa FPsc
Brara.K00800 5.0kb upstream 5.0kb upstream 7176 true Scaffold30042: 1308-8483 Brassica rapa FPsc
Brara.K00800 5.0kb upstream 5.0kb upstream 5000 false Scaffold30042: 1308-6307 Brassica rapa FPsc
Brara.K00800 5.0kb downstream 5.0kb downstream 7176 true Scaffold30042: 6308-13483 Brassica rapa FPsc
Brara.K00800 5.0kb downstream 5.0kb downstream 5000 false Scaffold30042: 8484-13483 Brassica rapa FPsc
Brara.K00800 10.0kb upstream 10.0kb upstream 8483 true Scaffold30042: 1-8483 Brassica rapa FPsc
Brara.K00800 10.0kb upstream 10.0kb upstream 6307 false Scaffold30042: 1-6307 Brassica rapa FPsc
Brara.K00800 10.0kb downstream 10.0kb downstream 12176 true Scaffold30042: 6308-18483 Brassica rapa FPsc
Brara.K00800 10.0kb downstream 10.0kb downstream 10000 false Scaffold30042: 8484-18483 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379054 5261 Brassicaceae View MSA
123802080 5264 Brassicales-Malvales View MSA
124299301 5266 SBM View MSA
124150753 5268 Malvidae View MSA
123876315 5270 Rosid View MSA
123460006 5271 Pentapetalae View MSA
122495387 5272 Eudicot View MSA
122043187 5273 Angiosperm View MSA
121310086 5274 Embryophyte View MSA
123347673 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier