Gene : Brara.C02828 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  2828
Name:  ? Brara.C02828 Secondary Identifier:  ? PAC:30616168
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02828 0.5kb upstream 0.5kb upstream 8015 true A03: 14544045-14552059 Brassica rapa FPsc
Brara.C02828 0.5kb upstream 0.5kb upstream 500 false A03: 14551560-14552059 Brassica rapa FPsc
Brara.C02828 0.5kb downstream 0.5kb downstream 8015 true A03: 14543545-14551559 Brassica rapa FPsc
Brara.C02828 0.5kb downstream 0.5kb downstream 500 false A03: 14543545-14544044 Brassica rapa FPsc
Brara.C02828 1.0kb upstream 1.0kb upstream 8515 true A03: 14544045-14552559 Brassica rapa FPsc
Brara.C02828 1.0kb upstream 1.0kb upstream 1000 false A03: 14551560-14552559 Brassica rapa FPsc
Brara.C02828 1.0kb downstream 1.0kb downstream 8515 true A03: 14543045-14551559 Brassica rapa FPsc
Brara.C02828 1.0kb downstream 1.0kb downstream 1000 false A03: 14543045-14544044 Brassica rapa FPsc
Brara.C02828 2.0kb upstream 2.0kb upstream 9515 true A03: 14544045-14553559 Brassica rapa FPsc
Brara.C02828 2.0kb upstream 2.0kb upstream 2000 false A03: 14551560-14553559 Brassica rapa FPsc
Brara.C02828 2.0kb downstream 2.0kb downstream 9515 true A03: 14542045-14551559 Brassica rapa FPsc
Brara.C02828 2.0kb downstream 2.0kb downstream 2000 false A03: 14542045-14544044 Brassica rapa FPsc
Brara.C02828 5.0kb upstream 5.0kb upstream 12515 true A03: 14544045-14556559 Brassica rapa FPsc
Brara.C02828 5.0kb upstream 5.0kb upstream 5000 false A03: 14551560-14556559 Brassica rapa FPsc
Brara.C02828 5.0kb downstream 5.0kb downstream 12515 true A03: 14539045-14551559 Brassica rapa FPsc
Brara.C02828 5.0kb downstream 5.0kb downstream 5000 false A03: 14539045-14544044 Brassica rapa FPsc
Brara.C02828 10.0kb upstream 10.0kb upstream 17515 true A03: 14544045-14561559 Brassica rapa FPsc
Brara.C02828 10.0kb upstream 10.0kb upstream 10000 false A03: 14551560-14561559 Brassica rapa FPsc
Brara.C02828 10.0kb downstream 10.0kb downstream 17515 true A03: 14534045-14551559 Brassica rapa FPsc
Brara.C02828 10.0kb downstream 10.0kb downstream 10000 false A03: 14534045-14544044 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371889 5261 Brassicaceae View MSA
123831702 5264 Brassicales-Malvales View MSA
124346183 5266 SBM View MSA
124252379 5268 Malvidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier