Gene : Brara.E03253 B. rapa FPsc v1.3
Defline:  (1 of 3) 4.2.1.55 - 3-hydroxybutyryl-CoA dehydratase / Crotonase Genomic Order:  3253
Name:  ? Brara.E03253 Secondary Identifier:  ? PAC:30624023
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ILEUDEG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5137 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5138 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6435 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6837 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7036 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  
BrapaFPsc VALDEG-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03253 0.5kb upstream 0.5kb upstream 5035 true A05: 26358055-26363089 Brassica rapa FPsc
Brara.E03253 0.5kb upstream 0.5kb upstream 500 false A05: 26362590-26363089 Brassica rapa FPsc
Brara.E03253 0.5kb downstream 0.5kb downstream 5035 true A05: 26357555-26362589 Brassica rapa FPsc
Brara.E03253 0.5kb downstream 0.5kb downstream 500 false A05: 26357555-26358054 Brassica rapa FPsc
Brara.E03253 1.0kb upstream 1.0kb upstream 5535 true A05: 26358055-26363589 Brassica rapa FPsc
Brara.E03253 1.0kb upstream 1.0kb upstream 1000 false A05: 26362590-26363589 Brassica rapa FPsc
Brara.E03253 1.0kb downstream 1.0kb downstream 5535 true A05: 26357055-26362589 Brassica rapa FPsc
Brara.E03253 1.0kb downstream 1.0kb downstream 1000 false A05: 26357055-26358054 Brassica rapa FPsc
Brara.E03253 2.0kb upstream 2.0kb upstream 6535 true A05: 26358055-26364589 Brassica rapa FPsc
Brara.E03253 2.0kb upstream 2.0kb upstream 2000 false A05: 26362590-26364589 Brassica rapa FPsc
Brara.E03253 2.0kb downstream 2.0kb downstream 6535 true A05: 26356055-26362589 Brassica rapa FPsc
Brara.E03253 2.0kb downstream 2.0kb downstream 2000 false A05: 26356055-26358054 Brassica rapa FPsc
Brara.E03253 5.0kb upstream 5.0kb upstream 9535 true A05: 26358055-26367589 Brassica rapa FPsc
Brara.E03253 5.0kb upstream 5.0kb upstream 5000 false A05: 26362590-26367589 Brassica rapa FPsc
Brara.E03253 5.0kb downstream 5.0kb downstream 9535 true A05: 26353055-26362589 Brassica rapa FPsc
Brara.E03253 5.0kb downstream 5.0kb downstream 5000 false A05: 26353055-26358054 Brassica rapa FPsc
Brara.E03253 10.0kb upstream 10.0kb upstream 14535 true A05: 26358055-26372589 Brassica rapa FPsc
Brara.E03253 10.0kb upstream 10.0kb upstream 10000 false A05: 26362590-26372589 Brassica rapa FPsc
Brara.E03253 10.0kb downstream 10.0kb downstream 14535 true A05: 26348055-26362589 Brassica rapa FPsc
Brara.E03253 10.0kb downstream 10.0kb downstream 10000 false A05: 26348055-26358054 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349264 5261 Brassicaceae Singleton cluster - no MSA
123788479 5264 Brassicales-Malvales Singleton cluster - no MSA
124286509 5266 SBM Singleton cluster - no MSA
124140362 5268 Malvidae Singleton cluster - no MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier