Gene : Brara.K00315 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10044//PTHR10044:SF112 - INHIBITOR OF APOPTOSIS Genomic Order:  3
Name:  ? Brara.K00315 Secondary Identifier:  ? PAC:30627550
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00315 0.5kb upstream 0.5kb upstream 1302 true Scaffold14751: 44942-46243 Brassica rapa FPsc
Brara.K00315 0.5kb upstream 0.5kb upstream 500 false Scaffold14751: 45744-46243 Brassica rapa FPsc
Brara.K00315 0.5kb downstream 0.5kb downstream 1302 true Scaffold14751: 44442-45743 Brassica rapa FPsc
Brara.K00315 0.5kb downstream 0.5kb downstream 500 false Scaffold14751: 44442-44941 Brassica rapa FPsc
Brara.K00315 1.0kb upstream 1.0kb upstream 1802 true Scaffold14751: 44942-46743 Brassica rapa FPsc
Brara.K00315 1.0kb upstream 1.0kb upstream 1000 false Scaffold14751: 45744-46743 Brassica rapa FPsc
Brara.K00315 1.0kb downstream 1.0kb downstream 1802 true Scaffold14751: 43942-45743 Brassica rapa FPsc
Brara.K00315 1.0kb downstream 1.0kb downstream 1000 false Scaffold14751: 43942-44941 Brassica rapa FPsc
Brara.K00315 2.0kb upstream 2.0kb upstream 2802 true Scaffold14751: 44942-47743 Brassica rapa FPsc
Brara.K00315 2.0kb upstream 2.0kb upstream 2000 false Scaffold14751: 45744-47743 Brassica rapa FPsc
Brara.K00315 2.0kb downstream 2.0kb downstream 2802 true Scaffold14751: 42942-45743 Brassica rapa FPsc
Brara.K00315 2.0kb downstream 2.0kb downstream 2000 false Scaffold14751: 42942-44941 Brassica rapa FPsc
Brara.K00315 5.0kb upstream 5.0kb upstream 5802 true Scaffold14751: 44942-50743 Brassica rapa FPsc
Brara.K00315 5.0kb upstream 5.0kb upstream 5000 false Scaffold14751: 45744-50743 Brassica rapa FPsc
Brara.K00315 5.0kb downstream 5.0kb downstream 5802 true Scaffold14751: 39942-45743 Brassica rapa FPsc
Brara.K00315 5.0kb downstream 5.0kb downstream 5000 false Scaffold14751: 39942-44941 Brassica rapa FPsc
Brara.K00315 10.0kb upstream 10.0kb upstream 10802 true Scaffold14751: 44942-55743 Brassica rapa FPsc
Brara.K00315 10.0kb upstream 10.0kb upstream 10000 false Scaffold14751: 45744-55743 Brassica rapa FPsc
Brara.K00315 10.0kb downstream 10.0kb downstream 10802 true Scaffold14751: 34942-45743 Brassica rapa FPsc
Brara.K00315 10.0kb downstream 10.0kb downstream 10000 false Scaffold14751: 34942-44941 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350063 5261 Brassicaceae Singleton cluster - no MSA
123840260 5264 Brassicales-Malvales View MSA
124337346 5266 SBM View MSA
124251552 5268 Malvidae View MSA
124074131 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier