Gene : Brara.K00179 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10920:SF13 - PRE-RRNA PROCESSING PROTEIN FTSJ3 Genomic Order:  163
Name:  ? Brara.K00179 Secondary Identifier:  ? PAC:30614608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00179 0.5kb upstream 0.5kb upstream 4142 true Scaffold10985: 926730-930871 Brassica rapa FPsc
Brara.K00179 0.5kb upstream 0.5kb upstream 500 false Scaffold10985: 926730-927229 Brassica rapa FPsc
Brara.K00179 0.5kb downstream 0.5kb downstream 4142 true Scaffold10985: 927230-931371 Brassica rapa FPsc
Brara.K00179 0.5kb downstream 0.5kb downstream 500 false Scaffold10985: 930872-931371 Brassica rapa FPsc
Brara.K00179 1.0kb upstream 1.0kb upstream 4642 true Scaffold10985: 926230-930871 Brassica rapa FPsc
Brara.K00179 1.0kb upstream 1.0kb upstream 1000 false Scaffold10985: 926230-927229 Brassica rapa FPsc
Brara.K00179 1.0kb downstream 1.0kb downstream 4642 true Scaffold10985: 927230-931871 Brassica rapa FPsc
Brara.K00179 1.0kb downstream 1.0kb downstream 1000 false Scaffold10985: 930872-931871 Brassica rapa FPsc
Brara.K00179 2.0kb upstream 2.0kb upstream 5642 true Scaffold10985: 925230-930871 Brassica rapa FPsc
Brara.K00179 2.0kb upstream 2.0kb upstream 2000 false Scaffold10985: 925230-927229 Brassica rapa FPsc
Brara.K00179 2.0kb downstream 2.0kb downstream 5642 true Scaffold10985: 927230-932871 Brassica rapa FPsc
Brara.K00179 2.0kb downstream 2.0kb downstream 2000 false Scaffold10985: 930872-932871 Brassica rapa FPsc
Brara.K00179 5.0kb upstream 5.0kb upstream 8642 true Scaffold10985: 922230-930871 Brassica rapa FPsc
Brara.K00179 5.0kb upstream 5.0kb upstream 5000 false Scaffold10985: 922230-927229 Brassica rapa FPsc
Brara.K00179 5.0kb downstream 5.0kb downstream 8642 true Scaffold10985: 927230-935871 Brassica rapa FPsc
Brara.K00179 5.0kb downstream 5.0kb downstream 5000 false Scaffold10985: 930872-935871 Brassica rapa FPsc
Brara.K00179 10.0kb upstream 10.0kb upstream 13642 true Scaffold10985: 917230-930871 Brassica rapa FPsc
Brara.K00179 10.0kb upstream 10.0kb upstream 10000 false Scaffold10985: 917230-927229 Brassica rapa FPsc
Brara.K00179 10.0kb downstream 10.0kb downstream 13642 true Scaffold10985: 927230-940871 Brassica rapa FPsc
Brara.K00179 10.0kb downstream 10.0kb downstream 10000 false Scaffold10985: 930872-940871 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362243 5261 Brassicaceae View MSA
123831880 5264 Brassicales-Malvales View MSA
124339310 5266 SBM View MSA
124242070 5268 Malvidae View MSA
124066192 5270 Rosid View MSA
123747132 5271 Pentapetalae View MSA
122787166 5272 Eudicot View MSA
122043455 5273 Angiosperm View MSA
121347110 5274 Embryophyte View MSA
123425494 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier