Gene : Brara.K00274 B. rapa FPsc v1.3
Defline:  (1 of 2) PF08513//PF10607 - LisH (LisH) // CTLH/CRA C-terminal to LisH motif domain (CLTH) Genomic Order:  31
Name:  ? Brara.K00274 Secondary Identifier:  ? PAC:30627447
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00274 0.5kb upstream 0.5kb upstream 3250 true Scaffold14072: 657442-660691 Brassica rapa FPsc
Brara.K00274 0.5kb upstream 0.5kb upstream 500 false Scaffold14072: 660192-660691 Brassica rapa FPsc
Brara.K00274 0.5kb downstream 0.5kb downstream 3250 true Scaffold14072: 656942-660191 Brassica rapa FPsc
Brara.K00274 0.5kb downstream 0.5kb downstream 500 false Scaffold14072: 656942-657441 Brassica rapa FPsc
Brara.K00274 1.0kb upstream 1.0kb upstream 3750 true Scaffold14072: 657442-661191 Brassica rapa FPsc
Brara.K00274 1.0kb upstream 1.0kb upstream 1000 false Scaffold14072: 660192-661191 Brassica rapa FPsc
Brara.K00274 1.0kb downstream 1.0kb downstream 3750 true Scaffold14072: 656442-660191 Brassica rapa FPsc
Brara.K00274 1.0kb downstream 1.0kb downstream 1000 false Scaffold14072: 656442-657441 Brassica rapa FPsc
Brara.K00274 2.0kb upstream 2.0kb upstream 4750 true Scaffold14072: 657442-662191 Brassica rapa FPsc
Brara.K00274 2.0kb upstream 2.0kb upstream 2000 false Scaffold14072: 660192-662191 Brassica rapa FPsc
Brara.K00274 2.0kb downstream 2.0kb downstream 4750 true Scaffold14072: 655442-660191 Brassica rapa FPsc
Brara.K00274 2.0kb downstream 2.0kb downstream 2000 false Scaffold14072: 655442-657441 Brassica rapa FPsc
Brara.K00274 5.0kb upstream 5.0kb upstream 7750 true Scaffold14072: 657442-665191 Brassica rapa FPsc
Brara.K00274 5.0kb upstream 5.0kb upstream 5000 false Scaffold14072: 660192-665191 Brassica rapa FPsc
Brara.K00274 5.0kb downstream 5.0kb downstream 7750 true Scaffold14072: 652442-660191 Brassica rapa FPsc
Brara.K00274 5.0kb downstream 5.0kb downstream 5000 false Scaffold14072: 652442-657441 Brassica rapa FPsc
Brara.K00274 10.0kb upstream 10.0kb upstream 12750 true Scaffold14072: 657442-670191 Brassica rapa FPsc
Brara.K00274 10.0kb upstream 10.0kb upstream 10000 false Scaffold14072: 660192-670191 Brassica rapa FPsc
Brara.K00274 10.0kb downstream 10.0kb downstream 12750 true Scaffold14072: 647442-660191 Brassica rapa FPsc
Brara.K00274 10.0kb downstream 10.0kb downstream 10000 false Scaffold14072: 647442-657441 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121505360 5273 Angiosperm Singleton cluster - no MSA
122350020 5261 Brassicaceae Singleton cluster - no MSA
123789120 5264 Brassicales-Malvales Singleton cluster - no MSA
124287124 5266 SBM Singleton cluster - no MSA
124140855 5268 Malvidae Singleton cluster - no MSA
123868001 5270 Rosid Singleton cluster - no MSA
123452768 5271 Pentapetalae Singleton cluster - no MSA
122488250 5272 Eudicot Singleton cluster - no MSA
120778572 5274 Embryophyte Singleton cluster - no MSA
122820754 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier