Gene : Brara.E03460 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR21402:SF10 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN Genomic Order:  3460
Name:  ? Brara.E03460 Secondary Identifier:  ? PAC:30625542
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03460 0.5kb upstream 0.5kb upstream 3598 true A05: 27444773-27448370 Brassica rapa FPsc
Brara.E03460 0.5kb upstream 0.5kb upstream 500 false A05: 27444773-27445272 Brassica rapa FPsc
Brara.E03460 0.5kb downstream 0.5kb downstream 3598 true A05: 27445273-27448870 Brassica rapa FPsc
Brara.E03460 0.5kb downstream 0.5kb downstream 500 false A05: 27448371-27448870 Brassica rapa FPsc
Brara.E03460 1.0kb upstream 1.0kb upstream 4098 true A05: 27444273-27448370 Brassica rapa FPsc
Brara.E03460 1.0kb upstream 1.0kb upstream 1000 false A05: 27444273-27445272 Brassica rapa FPsc
Brara.E03460 1.0kb downstream 1.0kb downstream 4098 true A05: 27445273-27449370 Brassica rapa FPsc
Brara.E03460 1.0kb downstream 1.0kb downstream 1000 false A05: 27448371-27449370 Brassica rapa FPsc
Brara.E03460 2.0kb upstream 2.0kb upstream 5098 true A05: 27443273-27448370 Brassica rapa FPsc
Brara.E03460 2.0kb upstream 2.0kb upstream 2000 false A05: 27443273-27445272 Brassica rapa FPsc
Brara.E03460 2.0kb downstream 2.0kb downstream 5098 true A05: 27445273-27450370 Brassica rapa FPsc
Brara.E03460 2.0kb downstream 2.0kb downstream 2000 false A05: 27448371-27450370 Brassica rapa FPsc
Brara.E03460 5.0kb upstream 5.0kb upstream 8098 true A05: 27440273-27448370 Brassica rapa FPsc
Brara.E03460 5.0kb upstream 5.0kb upstream 5000 false A05: 27440273-27445272 Brassica rapa FPsc
Brara.E03460 5.0kb downstream 5.0kb downstream 8098 true A05: 27445273-27453370 Brassica rapa FPsc
Brara.E03460 5.0kb downstream 5.0kb downstream 5000 false A05: 27448371-27453370 Brassica rapa FPsc
Brara.E03460 10.0kb upstream 10.0kb upstream 13098 true A05: 27435273-27448370 Brassica rapa FPsc
Brara.E03460 10.0kb upstream 10.0kb upstream 10000 false A05: 27435273-27445272 Brassica rapa FPsc
Brara.E03460 10.0kb downstream 10.0kb downstream 13098 true A05: 27445273-27458370 Brassica rapa FPsc
Brara.E03460 10.0kb downstream 10.0kb downstream 10000 false A05: 27448371-27458370 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349610 5261 Brassicaceae Singleton cluster - no MSA
123788769 5264 Brassicales-Malvales Singleton cluster - no MSA
124350065 5266 SBM View MSA
124239890 5268 Malvidae View MSA
124063423 5270 Rosid View MSA
123740826 5271 Pentapetalae View MSA
122788385 5272 Eudicot View MSA
122044714 5273 Angiosperm View MSA
121344837 5274 Embryophyte View MSA
123380110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier