Gene : Brara.K01815 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  75
Name:  ? Brara.K01815 Secondary Identifier:  ? PAC:30611220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01815 0.5kb upstream 0.5kb upstream 1658 true Scaffold87669: 554648-556305 Brassica rapa FPsc
Brara.K01815 0.5kb upstream 0.5kb upstream 500 false Scaffold87669: 554648-555147 Brassica rapa FPsc
Brara.K01815 0.5kb downstream 0.5kb downstream 1658 true Scaffold87669: 555148-556805 Brassica rapa FPsc
Brara.K01815 0.5kb downstream 0.5kb downstream 500 false Scaffold87669: 556306-556805 Brassica rapa FPsc
Brara.K01815 1.0kb upstream 1.0kb upstream 2158 true Scaffold87669: 554148-556305 Brassica rapa FPsc
Brara.K01815 1.0kb upstream 1.0kb upstream 1000 false Scaffold87669: 554148-555147 Brassica rapa FPsc
Brara.K01815 1.0kb downstream 1.0kb downstream 2158 true Scaffold87669: 555148-557305 Brassica rapa FPsc
Brara.K01815 1.0kb downstream 1.0kb downstream 1000 false Scaffold87669: 556306-557305 Brassica rapa FPsc
Brara.K01815 2.0kb upstream 2.0kb upstream 3158 true Scaffold87669: 553148-556305 Brassica rapa FPsc
Brara.K01815 2.0kb upstream 2.0kb upstream 2000 false Scaffold87669: 553148-555147 Brassica rapa FPsc
Brara.K01815 2.0kb downstream 2.0kb downstream 3158 true Scaffold87669: 555148-558305 Brassica rapa FPsc
Brara.K01815 2.0kb downstream 2.0kb downstream 2000 false Scaffold87669: 556306-558305 Brassica rapa FPsc
Brara.K01815 5.0kb upstream 5.0kb upstream 6158 true Scaffold87669: 550148-556305 Brassica rapa FPsc
Brara.K01815 5.0kb upstream 5.0kb upstream 5000 false Scaffold87669: 550148-555147 Brassica rapa FPsc
Brara.K01815 5.0kb downstream 5.0kb downstream 6158 true Scaffold87669: 555148-561305 Brassica rapa FPsc
Brara.K01815 5.0kb downstream 5.0kb downstream 5000 false Scaffold87669: 556306-561305 Brassica rapa FPsc
Brara.K01815 10.0kb upstream 10.0kb upstream 11158 true Scaffold87669: 545148-556305 Brassica rapa FPsc
Brara.K01815 10.0kb upstream 10.0kb upstream 10000 false Scaffold87669: 545148-555147 Brassica rapa FPsc
Brara.K01815 10.0kb downstream 10.0kb downstream 11158 true Scaffold87669: 555148-566305 Brassica rapa FPsc
Brara.K01815 10.0kb downstream 10.0kb downstream 10000 false Scaffold87669: 556306-566305 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122345893 5261 Brassicaceae Singleton cluster - no MSA
123839972 5264 Brassicales-Malvales View MSA
124343731 5266 SBM View MSA
124253277 5268 Malvidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier