Gene : Brara.C02976 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR33403:SF5 - PROTEIN SPIRAL1-LIKE 2-RELATED Genomic Order:  2976
Name:  ? Brara.C02976 Secondary Identifier:  ? PAC:30616911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02976 0.5kb upstream 0.5kb upstream 1565 true A03: 15200949-15202513 Brassica rapa FPsc
Brara.C02976 0.5kb upstream 0.5kb upstream 500 false A03: 15200949-15201448 Brassica rapa FPsc
Brara.C02976 0.5kb downstream 0.5kb downstream 1565 true A03: 15201449-15203013 Brassica rapa FPsc
Brara.C02976 0.5kb downstream 0.5kb downstream 500 false A03: 15202514-15203013 Brassica rapa FPsc
Brara.C02976 1.0kb upstream 1.0kb upstream 2065 true A03: 15200449-15202513 Brassica rapa FPsc
Brara.C02976 1.0kb upstream 1.0kb upstream 1000 false A03: 15200449-15201448 Brassica rapa FPsc
Brara.C02976 1.0kb downstream 1.0kb downstream 2065 true A03: 15201449-15203513 Brassica rapa FPsc
Brara.C02976 1.0kb downstream 1.0kb downstream 1000 false A03: 15202514-15203513 Brassica rapa FPsc
Brara.C02976 2.0kb upstream 2.0kb upstream 3065 true A03: 15199449-15202513 Brassica rapa FPsc
Brara.C02976 2.0kb upstream 2.0kb upstream 2000 false A03: 15199449-15201448 Brassica rapa FPsc
Brara.C02976 2.0kb downstream 2.0kb downstream 3065 true A03: 15201449-15204513 Brassica rapa FPsc
Brara.C02976 2.0kb downstream 2.0kb downstream 2000 false A03: 15202514-15204513 Brassica rapa FPsc
Brara.C02976 5.0kb upstream 5.0kb upstream 6065 true A03: 15196449-15202513 Brassica rapa FPsc
Brara.C02976 5.0kb upstream 5.0kb upstream 5000 false A03: 15196449-15201448 Brassica rapa FPsc
Brara.C02976 5.0kb downstream 5.0kb downstream 6065 true A03: 15201449-15207513 Brassica rapa FPsc
Brara.C02976 5.0kb downstream 5.0kb downstream 5000 false A03: 15202514-15207513 Brassica rapa FPsc
Brara.C02976 10.0kb upstream 10.0kb upstream 11065 true A03: 15191449-15202513 Brassica rapa FPsc
Brara.C02976 10.0kb upstream 10.0kb upstream 10000 false A03: 15191449-15201448 Brassica rapa FPsc
Brara.C02976 10.0kb downstream 10.0kb downstream 11065 true A03: 15201449-15212513 Brassica rapa FPsc
Brara.C02976 10.0kb downstream 10.0kb downstream 10000 false A03: 15202514-15212513 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347352 5261 Brassicaceae Singleton cluster - no MSA
123786888 5264 Brassicales-Malvales Singleton cluster - no MSA
124284982 5266 SBM Singleton cluster - no MSA
124253135 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier