Gene : Brara.K01472 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12300//PTHR12300:SF58 - HVA22-LIKE PROTEINS Genomic Order:  1
Name:  ? Brara.K01472 Secondary Identifier:  ? PAC:30646884
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01472 0.5kb upstream 0.5kb upstream 1354 true Scaffold70077: 24921-26274 Brassica rapa FPsc
Brara.K01472 0.5kb upstream 0.5kb upstream 500 false Scaffold70077: 25775-26274 Brassica rapa FPsc
Brara.K01472 0.5kb downstream 0.5kb downstream 1354 true Scaffold70077: 24421-25774 Brassica rapa FPsc
Brara.K01472 0.5kb downstream 0.5kb downstream 500 false Scaffold70077: 24421-24920 Brassica rapa FPsc
Brara.K01472 1.0kb upstream 1.0kb upstream 1854 true Scaffold70077: 24921-26774 Brassica rapa FPsc
Brara.K01472 1.0kb upstream 1.0kb upstream 1000 false Scaffold70077: 25775-26774 Brassica rapa FPsc
Brara.K01472 1.0kb downstream 1.0kb downstream 1854 true Scaffold70077: 23921-25774 Brassica rapa FPsc
Brara.K01472 1.0kb downstream 1.0kb downstream 1000 false Scaffold70077: 23921-24920 Brassica rapa FPsc
Brara.K01472 2.0kb upstream 2.0kb upstream 2854 true Scaffold70077: 24921-27774 Brassica rapa FPsc
Brara.K01472 2.0kb upstream 2.0kb upstream 2000 false Scaffold70077: 25775-27774 Brassica rapa FPsc
Brara.K01472 2.0kb downstream 2.0kb downstream 2854 true Scaffold70077: 22921-25774 Brassica rapa FPsc
Brara.K01472 2.0kb downstream 2.0kb downstream 2000 false Scaffold70077: 22921-24920 Brassica rapa FPsc
Brara.K01472 5.0kb upstream 5.0kb upstream 5854 true Scaffold70077: 24921-30774 Brassica rapa FPsc
Brara.K01472 5.0kb upstream 5.0kb upstream 5000 false Scaffold70077: 25775-30774 Brassica rapa FPsc
Brara.K01472 5.0kb downstream 5.0kb downstream 5854 true Scaffold70077: 19921-25774 Brassica rapa FPsc
Brara.K01472 5.0kb downstream 5.0kb downstream 5000 false Scaffold70077: 19921-24920 Brassica rapa FPsc
Brara.K01472 10.0kb upstream 10.0kb upstream 10854 true Scaffold70077: 24921-35774 Brassica rapa FPsc
Brara.K01472 10.0kb upstream 10.0kb upstream 10000 false Scaffold70077: 25775-35774 Brassica rapa FPsc
Brara.K01472 10.0kb downstream 10.0kb downstream 10854 true Scaffold70077: 14921-25774 Brassica rapa FPsc
Brara.K01472 10.0kb downstream 10.0kb downstream 10000 false Scaffold70077: 14921-24920 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380293 5261 Brassicaceae View MSA
123839271 5264 Brassicales-Malvales View MSA
124322593 5266 SBM View MSA
124248122 5268 Malvidae View MSA
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier