Gene : Brara.K01343 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR18896:SF60 - PHOSPHOLIPASE D DELTA Genomic Order:  75
Name:  ? Brara.K01343 Secondary Identifier:  ? PAC:30623342
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7039 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01343 0.5kb upstream 0.5kb upstream 4086 true Scaffold58736: 651193-655278 Brassica rapa FPsc
Brara.K01343 0.5kb upstream 0.5kb upstream 500 false Scaffold58736: 651193-651692 Brassica rapa FPsc
Brara.K01343 0.5kb downstream 0.5kb downstream 4086 true Scaffold58736: 651693-655778 Brassica rapa FPsc
Brara.K01343 0.5kb downstream 0.5kb downstream 500 false Scaffold58736: 655279-655778 Brassica rapa FPsc
Brara.K01343 1.0kb upstream 1.0kb upstream 4586 true Scaffold58736: 650693-655278 Brassica rapa FPsc
Brara.K01343 1.0kb upstream 1.0kb upstream 1000 false Scaffold58736: 650693-651692 Brassica rapa FPsc
Brara.K01343 1.0kb downstream 1.0kb downstream 4586 true Scaffold58736: 651693-656278 Brassica rapa FPsc
Brara.K01343 1.0kb downstream 1.0kb downstream 1000 false Scaffold58736: 655279-656278 Brassica rapa FPsc
Brara.K01343 2.0kb upstream 2.0kb upstream 5586 true Scaffold58736: 649693-655278 Brassica rapa FPsc
Brara.K01343 2.0kb upstream 2.0kb upstream 2000 false Scaffold58736: 649693-651692 Brassica rapa FPsc
Brara.K01343 2.0kb downstream 2.0kb downstream 5586 true Scaffold58736: 651693-657278 Brassica rapa FPsc
Brara.K01343 2.0kb downstream 2.0kb downstream 2000 false Scaffold58736: 655279-657278 Brassica rapa FPsc
Brara.K01343 5.0kb upstream 5.0kb upstream 8586 true Scaffold58736: 646693-655278 Brassica rapa FPsc
Brara.K01343 5.0kb upstream 5.0kb upstream 5000 false Scaffold58736: 646693-651692 Brassica rapa FPsc
Brara.K01343 5.0kb downstream 5.0kb downstream 8586 true Scaffold58736: 651693-660278 Brassica rapa FPsc
Brara.K01343 5.0kb downstream 5.0kb downstream 5000 false Scaffold58736: 655279-660278 Brassica rapa FPsc
Brara.K01343 10.0kb upstream 10.0kb upstream 13586 true Scaffold58736: 641693-655278 Brassica rapa FPsc
Brara.K01343 10.0kb upstream 10.0kb upstream 10000 false Scaffold58736: 641693-651692 Brassica rapa FPsc
Brara.K01343 10.0kb downstream 10.0kb downstream 13586 true Scaffold58736: 651693-665278 Brassica rapa FPsc
Brara.K01343 10.0kb downstream 10.0kb downstream 10000 false Scaffold58736: 655279-665278 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373101 5261 Brassicaceae View MSA
123831144 5264 Brassicales-Malvales View MSA
124343359 5266 SBM View MSA
124240959 5268 Malvidae View MSA
124069649 5270 Rosid View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier